Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp49Q6P9L4 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp49Q6P9L4 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp49Q6P9L4 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp49Q6P9L4 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.3□□□□□ -0.12
Usp49Q6P9L4 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp49Q6P9L4 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp49Q6P9L4 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.3□□□□□ -0.12
Usp49Q6P9L4 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.3□□□□□ -0.12
Usp49Q6P9L4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp49Q6P9L4 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Usp49Q6P9L4 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp49Q6P9L4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Gm1335-201ENSMUST00000121653 386 ntBASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.29□□□□□ -0.12
Usp49Q6P9L4 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Gm38092-201ENSMUST00000195600 653 ntBASIC14.29□□□□□ -0.12
Usp49Q6P9L4 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp49Q6P9L4 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Gm26927-201ENSMUST00000182385 965 ntBASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Gm8099-201ENSMUST00000200510 742 ntBASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Gm43630-201ENSMUST00000201550 776 ntBASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Gm6007-201ENSMUST00000208170 823 ntBASIC14.28□□□□□ -0.12
Usp49Q6P9L4 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.28□□□□□ -0.12
Usp49Q6P9L4 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.28□□□□□ -0.12
Usp49Q6P9L4 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Gm10268-201ENSMUST00000085340 555 ntBASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp49Q6P9L4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.27□□□□□ -0.12
Usp49Q6P9L4 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp49Q6P9L4 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.27□□□□□ -0.12
Usp49Q6P9L4 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp49Q6P9L4 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp49Q6P9L4 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp49Q6P9L4 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp49Q6P9L4 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.27□□□□□ -0.12
Usp49Q6P9L4 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp49Q6P9L4 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp49Q6P9L4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp49Q6P9L4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp49Q6P9L4 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp49Q6P9L4 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp49Q6P9L4 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms