Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Gm12857-201ENSMUST00000117678 592 ntBASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Gm25951-201ENSMUST00000175330 64 ntBASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Gm10288-201ENSMUST00000084614 537 ntBASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Gm9129-201ENSMUST00000218173 1689 ntBASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slx4Q6P1D7 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Slx4Q6P1D7 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slx4Q6P1D7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slx4Q6P1D7 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC19.3■□□□□ 0.68
Slx4Q6P1D7 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slx4Q6P1D7 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slx4Q6P1D7 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slx4Q6P1D7 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC19.3■□□□□ 0.68
Slx4Q6P1D7 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Slx4Q6P1D7 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Slx4Q6P1D7 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slx4Q6P1D7 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC19.3■□□□□ 0.68
Slx4Q6P1D7 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slx4Q6P1D7 Gm19166-201ENSMUST00000196041 1063 ntBASIC19.3■□□□□ 0.68
Slx4Q6P1D7 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Slx4Q6P1D7 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slx4Q6P1D7 AC151895.1-201ENSMUST00000219025 1742 ntBASIC19.3■□□□□ 0.68
Slx4Q6P1D7 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
Slx4Q6P1D7 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slx4Q6P1D7 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slx4Q6P1D7 Gm7114-201ENSMUST00000190159 1789 ntBASIC19.29■□□□□ 0.68
Slx4Q6P1D7 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Slx4Q6P1D7 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slx4Q6P1D7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slx4Q6P1D7 Gm6210-201ENSMUST00000204734 1942 ntBASIC19.29■□□□□ 0.68
Slx4Q6P1D7 Gm26286-201ENSMUST00000104166 134 ntBASIC19.29■□□□□ 0.68
Slx4Q6P1D7 Gm24891-201ENSMUST00000104391 136 ntBASIC19.29■□□□□ 0.68
Slx4Q6P1D7 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slx4Q6P1D7 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC19.29■□□□□ 0.68
Slx4Q6P1D7 Gm37458-201ENSMUST00000194055 410 ntBASIC19.29■□□□□ 0.68
Slx4Q6P1D7 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC19.29■□□□□ 0.68
Slx4Q6P1D7 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slx4Q6P1D7 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slx4Q6P1D7 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slx4Q6P1D7 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC19.29■□□□□ 0.68
Slx4Q6P1D7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slx4Q6P1D7 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slx4Q6P1D7 Gm5847-201ENSMUST00000178959 1595 ntBASIC19.29■□□□□ 0.68
Slx4Q6P1D7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slx4Q6P1D7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slx4Q6P1D7 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slx4Q6P1D7 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slx4Q6P1D7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slx4Q6P1D7 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slx4Q6P1D7 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slx4Q6P1D7 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC19.28■□□□□ 0.68
Slx4Q6P1D7 Gm4726-201ENSMUST00000135604 736 ntBASIC19.28■□□□□ 0.68
Slx4Q6P1D7 Gm6019-201ENSMUST00000148369 736 ntBASIC19.28■□□□□ 0.68
Slx4Q6P1D7 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC19.28■□□□□ 0.68
Slx4Q6P1D7 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC19.28■□□□□ 0.68
Slx4Q6P1D7 CT571245.2-201ENSMUST00000218421 305 ntBASIC19.28■□□□□ 0.68
Slx4Q6P1D7 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slx4Q6P1D7 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slx4Q6P1D7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Slx4Q6P1D7 Gm45706-201ENSMUST00000213063 2136 ntBASIC19.28■□□□□ 0.68
Slx4Q6P1D7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Slx4Q6P1D7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slx4Q6P1D7 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC19.27■□□□□ 0.68
Slx4Q6P1D7 Gm28388-201ENSMUST00000186262 437 ntBASIC19.27■□□□□ 0.68
Slx4Q6P1D7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slx4Q6P1D7 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Slx4Q6P1D7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Slx4Q6P1D7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slx4Q6P1D7 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Slx4Q6P1D7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slx4Q6P1D7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slx4Q6P1D7 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slx4Q6P1D7 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slx4Q6P1D7 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slx4Q6P1D7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slx4Q6P1D7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slx4Q6P1D7 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC19.27■□□□□ 0.67
Slx4Q6P1D7 Gm12816-201ENSMUST00000118069 1212 ntBASIC19.27■□□□□ 0.67
Slx4Q6P1D7 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Slx4Q6P1D7 Rprl1-201ENSMUST00000158050 327 ntBASIC19.27■□□□□ 0.67
Slx4Q6P1D7 Gm6485-201ENSMUST00000160676 439 ntBASIC19.27■□□□□ 0.67
Slx4Q6P1D7 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
Slx4Q6P1D7 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Slx4Q6P1D7 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Slx4Q6P1D7 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC19.27■□□□□ 0.67
Slx4Q6P1D7 AC122408.1-201ENSMUST00000218949 218 ntBASIC19.27■□□□□ 0.67
Slx4Q6P1D7 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Slx4Q6P1D7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Slx4Q6P1D7 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Slx4Q6P1D7 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms