Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sp140Q6NSQ5 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sp140Q6NSQ5 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Sp140Q6NSQ5 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sp140Q6NSQ5 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sp140Q6NSQ5 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sp140Q6NSQ5 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Snord83b-201ENSMUST00000104546 94 ntBASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Gm22121-201ENSMUST00000175148 54 ntBASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Gm37042-201ENSMUST00000193816 581 ntBASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Gm29705-201ENSMUST00000212598 474 ntBASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sp140Q6NSQ5 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.96□□□□□ -0.34
Sp140Q6NSQ5 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sp140Q6NSQ5 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sp140Q6NSQ5 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.96□□□□□ -0.34
Sp140Q6NSQ5 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sp140Q6NSQ5 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.34
Sp140Q6NSQ5 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Sp140Q6NSQ5 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Sp140Q6NSQ5 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sp140Q6NSQ5 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sp140Q6NSQ5 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sp140Q6NSQ5 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sp140Q6NSQ5 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sp140Q6NSQ5 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Gm26185-201ENSMUST00000157692 266 ntBASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Gm27486-201ENSMUST00000184923 80 ntBASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Gm7561-201ENSMUST00000211203 886 ntBASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sp140Q6NSQ5 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms