Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gm12969-201ENSMUST00000120199 1004 ntBASIC15.11■□□□□ 0.01
Col11a2Q64739 Gm13328-201ENSMUST00000120816 1020 ntBASIC15.11■□□□□ 0.01
Col11a2Q64739 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a2Q64739 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC15.11■□□□□ 0.01
Col11a2Q64739 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC15.11■□□□□ 0.01
Col11a2Q64739 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a2Q64739 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a2Q64739 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a2Q64739 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC15.11■□□□□ 0.01
Col11a2Q64739 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC15.11■□□□□ 0.01
Col11a2Q64739 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a2Q64739 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col11a2Q64739 Gm5714-201ENSMUST00000197343 566 ntBASIC15.11■□□□□ 0.01
Col11a2Q64739 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC15.11■□□□□ 0.01
Col11a2Q64739 AC121960.1-201ENSMUST00000227982 564 ntBASIC15.11■□□□□ 0.01
Col11a2Q64739 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Col11a2Q64739 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Col11a2Q64739 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a2Q64739 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a2Q64739 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Col11a2Q64739 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a2Q64739 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a2Q64739 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a2Q64739 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a2Q64739 Gm13910-201ENSMUST00000121752 1428 ntBASIC15.1■□□□□ 0.01
Col11a2Q64739 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a2Q64739 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a2Q64739 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a2Q64739 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a2Q64739 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a2Q64739 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Col11a2Q64739 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a2Q64739 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a2Q64739 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.1■□□□□ 0.01
Col11a2Q64739 Gm22920-201ENSMUST00000102175 109 ntBASIC15.1■□□□□ 0.01
Col11a2Q64739 Gm12419-201ENSMUST00000116649 636 ntBASIC15.1■□□□□ 0.01
Col11a2Q64739 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC15.1■□□□□ 0.01
Col11a2Q64739 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC15.1■□□□□ 0.01
Col11a2Q64739 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.1■□□□□ 0.01
Col11a2Q64739 AC112945.1-201ENSMUST00000226413 514 ntBASIC15.1■□□□□ 0.01
Col11a2Q64739 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a2Q64739 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a2Q64739 Gm10152-201ENSMUST00000193475 1344 ntBASIC15.1■□□□□ 0.01
Col11a2Q64739 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Col11a2Q64739 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC15.1■□□□□ 0.01
Col11a2Q64739 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a2Q64739 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a2Q64739 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Col11a2Q64739 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a2Q64739 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a2Q64739 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a2Q64739 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a2Q64739 AC126257.1-201ENSMUST00000213195 1536 ntBASIC15.1■□□□□ 0.01
Col11a2Q64739 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a2Q64739 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC15.1■□□□□ 0.01
Col11a2Q64739 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a2Q64739 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a2Q64739 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Col11a2Q64739 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a2Q64739 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col11a2Q64739 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col11a2Q64739 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Col11a2Q64739 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col11a2Q64739 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col11a2Q64739 Gm11422-201ENSMUST00000118925 1103 ntBASIC15.09■□□□□ 0.01
Col11a2Q64739 Gm12990-201ENSMUST00000120372 468 ntBASIC15.09■□□□□ 0.01
Col11a2Q64739 Gm14760-201ENSMUST00000121831 999 ntBASIC15.09■□□□□ 0.01
Col11a2Q64739 Gm11354-201ENSMUST00000121974 422 ntBASIC15.09■□□□□ 0.01
Col11a2Q64739 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col11a2Q64739 Gm43692-201ENSMUST00000198236 1062 ntBASIC15.09■□□□□ 0.01
Col11a2Q64739 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col11a2Q64739 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col11a2Q64739 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Col11a2Q64739 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col11a2Q64739 Gm7537-201ENSMUST00000221660 1414 ntBASIC15.09■□□□□ 0.01
Col11a2Q64739 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col11a2Q64739 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col11a2Q64739 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Col11a2Q64739 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col11a2Q64739 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col11a2Q64739 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col11a2Q64739 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col11a2Q64739 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col11a2Q64739 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col11a2Q64739 Gm7541-201ENSMUST00000118361 535 ntBASIC15.09■□□□□ 0.01
Col11a2Q64739 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC15.09■□□□□ 0.01
Col11a2Q64739 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC15.09■□□□□ 0.01
Col11a2Q64739 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col11a2Q64739 Gm4310-201ENSMUST00000177847 889 ntBASIC15.09■□□□□ 0.01
Col11a2Q64739 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC15.09■□□□□ 0.01
Col11a2Q64739 Gm10371-202ENSMUST00000228010 1081 ntBASIC15.09■□□□□ 0.01
Col11a2Q64739 Gm5537-201ENSMUST00000091117 1252 ntBASIC15.09■□□□□ 0.01
Col11a2Q64739 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col11a2Q64739 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.08■□□□□ 0.01
Col11a2Q64739 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col11a2Q64739 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Col11a2Q64739 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col11a2Q64739 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Col11a2Q64739 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Col11a2Q64739 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms