Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC16.22■□□□□ 0.19
Clcn1Q64347 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC16.22■□□□□ 0.19
Clcn1Q64347 CT009764.1-201ENSMUST00000222260 483 ntBASIC16.22■□□□□ 0.19
Clcn1Q64347 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.22■□□□□ 0.19
Clcn1Q64347 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn1Q64347 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn1Q64347 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn1Q64347 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Clcn1Q64347 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn1Q64347 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn1Q64347 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn1Q64347 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn1Q64347 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn1Q64347 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Clcn1Q64347 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn1Q64347 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn1Q64347 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn1Q64347 AC164702.1-201ENSMUST00000220135 2212 ntBASIC16.22■□□□□ 0.19
Clcn1Q64347 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.22■□□□□ 0.19
Clcn1Q64347 Gm4864-201ENSMUST00000219894 1461 ntBASIC16.22■□□□□ 0.19
Clcn1Q64347 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Clcn1Q64347 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn1Q64347 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC16.21■□□□□ 0.19
Clcn1Q64347 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn1Q64347 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn1Q64347 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn1Q64347 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Clcn1Q64347 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn1Q64347 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Clcn1Q64347 Gm23200-201ENSMUST00000104379 132 ntBASIC16.21■□□□□ 0.19
Clcn1Q64347 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn1Q64347 Gm14109-201ENSMUST00000118814 309 ntBASIC16.21■□□□□ 0.19
Clcn1Q64347 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn1Q64347 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn1Q64347 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Clcn1Q64347 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn1Q64347 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC16.21■□□□□ 0.19
Clcn1Q64347 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Clcn1Q64347 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn1Q64347 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn1Q64347 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn1Q64347 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Clcn1Q64347 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn1Q64347 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn1Q64347 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn1Q64347 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn1Q64347 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn1Q64347 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC16.21■□□□□ 0.18
Clcn1Q64347 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Clcn1Q64347 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Clcn1Q64347 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clcn1Q64347 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clcn1Q64347 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clcn1Q64347 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Clcn1Q64347 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Clcn1Q64347 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC16.2■□□□□ 0.18
Clcn1Q64347 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Clcn1Q64347 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Clcn1Q64347 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Clcn1Q64347 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Clcn1Q64347 Gm28450-201ENSMUST00000187349 638 ntBASIC16.2■□□□□ 0.18
Clcn1Q64347 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC16.2■□□□□ 0.18
Clcn1Q64347 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC16.2■□□□□ 0.18
Clcn1Q64347 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC16.2■□□□□ 0.18
Clcn1Q64347 AC167013.1-201ENSMUST00000228592 202 ntBASIC16.2■□□□□ 0.18
Clcn1Q64347 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC16.2■□□□□ 0.18
Clcn1Q64347 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.2■□□□□ 0.18
Clcn1Q64347 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Clcn1Q64347 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn1Q64347 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn1Q64347 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn1Q64347 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn1Q64347 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn1Q64347 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn1Q64347 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Clcn1Q64347 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms