Protein–RNA interactions for Protein: Q64336

Tbr1, T-box brain protein 1, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tbr1Q64336 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.48□□□□□ -0.57
Tbr1Q64336 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tbr1Q64336 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tbr1Q64336 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tbr1Q64336 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tbr1Q64336 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Tbr1Q64336 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Tbr1Q64336 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tbr1Q64336 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tbr1Q64336 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.47□□□□□ -0.57
Tbr1Q64336 Selenot-ps-201ENSMUST00000119098 593 ntBASIC11.47□□□□□ -0.57
Tbr1Q64336 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.47□□□□□ -0.57
Tbr1Q64336 Gm10051-201ENSMUST00000145209 414 ntBASIC11.47□□□□□ -0.57
Tbr1Q64336 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Gm19931-201ENSMUST00000198920 368 ntBASIC11.47□□□□□ -0.57
Tbr1Q64336 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.47□□□□□ -0.57
Tbr1Q64336 Gm5369-201ENSMUST00000217499 588 ntBASIC11.47□□□□□ -0.57
Tbr1Q64336 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.47□□□□□ -0.57
Tbr1Q64336 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Tbr1Q64336 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.47□□□□□ -0.57
Tbr1Q64336 Mir339-201ENSMUST00000083659 96 ntBASIC11.47□□□□□ -0.57
Tbr1Q64336 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.47□□□□□ -0.57
Tbr1Q64336 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Tbr1Q64336 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.47□□□□□ -0.57
Tbr1Q64336 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tbr1Q64336 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.46□□□□□ -0.57
Tbr1Q64336 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tbr1Q64336 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tbr1Q64336 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Tbr1Q64336 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tbr1Q64336 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tbr1Q64336 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tbr1Q64336 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tbr1Q64336 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tbr1Q64336 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tbr1Q64336 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tbr1Q64336 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tbr1Q64336 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tbr1Q64336 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.46□□□□□ -0.57
Tbr1Q64336 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tbr1Q64336 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tbr1Q64336 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tbr1Q64336 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tbr1Q64336 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tbr1Q64336 Gm15515-201ENSMUST00000117827 822 ntBASIC11.46□□□□□ -0.57
Tbr1Q64336 Gm12029-201ENSMUST00000120073 832 ntBASIC11.46□□□□□ -0.57
Tbr1Q64336 Gm16397-201ENSMUST00000122201 494 ntBASIC11.46□□□□□ -0.57
Tbr1Q64336 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tbr1Q64336 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Tbr1Q64336 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tbr1Q64336 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tbr1Q64336 Mir7221-201ENSMUST00000184009 72 ntBASIC11.46□□□□□ -0.57
Tbr1Q64336 Gm18558-201ENSMUST00000186253 1214 ntBASIC11.46□□□□□ -0.57
Tbr1Q64336 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.46□□□□□ -0.57
Tbr1Q64336 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.46□□□□□ -0.57
Tbr1Q64336 Gm10752-201ENSMUST00000218348 729 ntBASIC11.46□□□□□ -0.57
Tbr1Q64336 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.46□□□□□ -0.57
Tbr1Q64336 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.46□□□□□ -0.57
Tbr1Q64336 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tbr1Q64336 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tbr1Q64336 Gm25007-201ENSMUST00000083808 133 ntBASIC11.46□□□□□ -0.57
Tbr1Q64336 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Tbr1Q64336 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Tbr1Q64336 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Tbr1Q64336 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Tbr1Q64336 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tbr1Q64336 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tbr1Q64336 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tbr1Q64336 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tbr1Q64336 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.46□□□□□ -0.58
Tbr1Q64336 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tbr1Q64336 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms