Protein–RNA interactions for Protein: Q64287

Irf4, Interferon regulatory factor 4, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf4Q64287 Gm37259-201ENSMUST00000193903 849 ntBASIC12.55□□□□□ -0.4
Irf4Q64287 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.55□□□□□ -0.4
Irf4Q64287 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.55□□□□□ -0.4
Irf4Q64287 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.55□□□□□ -0.4
Irf4Q64287 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.55□□□□□ -0.4
Irf4Q64287 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Irf4Q64287 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.54□□□□□ -0.4
Irf4Q64287 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Irf4Q64287 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Gm13875-201ENSMUST00000120162 282 ntBASIC12.54□□□□□ -0.4
Irf4Q64287 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Gm16296-201ENSMUST00000159905 325 ntBASIC12.54□□□□□ -0.4
Irf4Q64287 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Irf4Q64287 Gm2546-201ENSMUST00000182630 991 ntBASIC12.54□□□□□ -0.4
Irf4Q64287 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.54□□□□□ -0.4
Irf4Q64287 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.54□□□□□ -0.4
Irf4Q64287 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.54□□□□□ -0.4
Irf4Q64287 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.54□□□□□ -0.4
Irf4Q64287 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.54□□□□□ -0.4
Irf4Q64287 Gm21769-201ENSMUST00000211922 111 ntBASIC12.54□□□□□ -0.4
Irf4Q64287 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.54□□□□□ -0.4
Irf4Q64287 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.54□□□□□ -0.4
Irf4Q64287 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Irf4Q64287 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Irf4Q64287 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Irf4Q64287 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Irf4Q64287 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Irf4Q64287 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Irf4Q64287 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.53□□□□□ -0.4
Irf4Q64287 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Irf4Q64287 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.53□□□□□ -0.4
Irf4Q64287 Gm24255-201ENSMUST00000104481 128 ntBASIC12.53□□□□□ -0.4
Irf4Q64287 Gm14381-201ENSMUST00000122105 414 ntBASIC12.53□□□□□ -0.4
Irf4Q64287 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.53□□□□□ -0.4
Irf4Q64287 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.53□□□□□ -0.4
Irf4Q64287 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.53□□□□□ -0.4
Irf4Q64287 Gm30285-201ENSMUST00000214614 422 ntBASIC12.53□□□□□ -0.4
Irf4Q64287 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.53□□□□□ -0.4
Irf4Q64287 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.53□□□□□ -0.4
Irf4Q64287 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Irf4Q64287 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Irf4Q64287 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Irf4Q64287 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Irf4Q64287 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Irf4Q64287 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Irf4Q64287 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.52□□□□□ -0.4
Irf4Q64287 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Irf4Q64287 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.52□□□□□ -0.4
Irf4Q64287 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Irf4Q64287 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.52□□□□□ -0.4
Irf4Q64287 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms