Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Scn9aQ62205 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC14.74□□□□□ -0.05
Scn9aQ62205 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 Gm9022-201ENSMUST00000182482 992 ntBASIC14.74□□□□□ -0.05
Scn9aQ62205 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Scn9aQ62205 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.74□□□□□ -0.05
Scn9aQ62205 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.74□□□□□ -0.05
Scn9aQ62205 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.74□□□□□ -0.05
Scn9aQ62205 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.74□□□□□ -0.05
Scn9aQ62205 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Scn9aQ62205 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Scn9aQ62205 Gm13937-201ENSMUST00000121000 988 ntBASIC14.74□□□□□ -0.05
Scn9aQ62205 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 Mir8115-201ENSMUST00000184992 119 ntBASIC14.74□□□□□ -0.05
Scn9aQ62205 Gm43184-201ENSMUST00000197247 542 ntBASIC14.74□□□□□ -0.05
Scn9aQ62205 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.74□□□□□ -0.05
Scn9aQ62205 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC14.74□□□□□ -0.05
Scn9aQ62205 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.74□□□□□ -0.05
Scn9aQ62205 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Scn9aQ62205 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Scn9aQ62205 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn9aQ62205 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Scn9aQ62205 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Scn9aQ62205 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Scn9aQ62205 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.73□□□□□ -0.05
Scn9aQ62205 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.73□□□□□ -0.05
Scn9aQ62205 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC14.73□□□□□ -0.05
Scn9aQ62205 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.73□□□□□ -0.05
Scn9aQ62205 Prrxl1-205ENSMUST00000228878 723 ntBASIC14.73□□□□□ -0.05
Scn9aQ62205 Gm8325-201ENSMUST00000099086 453 ntBASIC14.73□□□□□ -0.05
Scn9aQ62205 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Scn9aQ62205 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.73□□□□□ -0.05
Scn9aQ62205 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Scn9aQ62205 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.73□□□□□ -0.05
Scn9aQ62205 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Scn9aQ62205 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Scn9aQ62205 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Scn9aQ62205 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.73□□□□□ -0.05
Scn9aQ62205 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 Gm16166-201ENSMUST00000118291 787 ntBASIC14.73□□□□□ -0.05
Scn9aQ62205 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.73□□□□□ -0.05
Scn9aQ62205 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 Gm6867-201ENSMUST00000219165 425 ntBASIC14.73□□□□□ -0.05
Scn9aQ62205 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.73□□□□□ -0.05
Scn9aQ62205 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn9aQ62205 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scn9aQ62205 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn9aQ62205 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scn9aQ62205 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn9aQ62205 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Scn9aQ62205 Matn2-206ENSMUST00000228570 2798 ntBASIC14.72□□□□□ -0.05
Scn9aQ62205 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scn9aQ62205 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Scn9aQ62205 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Scn9aQ62205 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC14.72□□□□□ -0.05
Scn9aQ62205 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC14.72□□□□□ -0.05
Scn9aQ62205 Gm23045-201ENSMUST00000175041 96 ntBASIC14.72□□□□□ -0.05
Scn9aQ62205 Mir6998-201ENSMUST00000183343 64 ntBASIC14.72□□□□□ -0.05
Scn9aQ62205 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Scn9aQ62205 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.72□□□□□ -0.05
Scn9aQ62205 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms