Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sox17Q61473 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.97□□□□□ -0.49
Sox17Q61473 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sox17Q61473 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Sox17Q61473 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.97□□□□□ -0.49
Sox17Q61473 Gm22175-201ENSMUST00000175007 78 ntBASIC11.97□□□□□ -0.49
Sox17Q61473 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.97□□□□□ -0.49
Sox17Q61473 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Gm19078-201ENSMUST00000206311 727 ntBASIC11.97□□□□□ -0.49
Sox17Q61473 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox17Q61473 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox17Q61473 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.97□□□□□ -0.49
Sox17Q61473 Gm26315-201ENSMUST00000083890 321 ntBASIC11.97□□□□□ -0.49
Sox17Q61473 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sox17Q61473 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Sox17Q61473 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Sox17Q61473 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Sox17Q61473 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox17Q61473 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox17Q61473 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox17Q61473 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Sox17Q61473 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox17Q61473 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Sox17Q61473 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox17Q61473 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox17Q61473 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Sox17Q61473 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox17Q61473 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox17Q61473 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox17Q61473 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox17Q61473 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox17Q61473 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.96□□□□□ -0.49
Sox17Q61473 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox17Q61473 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.96□□□□□ -0.49
Sox17Q61473 Gm11978-201ENSMUST00000122315 466 ntBASIC11.96□□□□□ -0.49
Sox17Q61473 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.96□□□□□ -0.49
Sox17Q61473 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.96□□□□□ -0.49
Sox17Q61473 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.96□□□□□ -0.49
Sox17Q61473 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.96□□□□□ -0.49
Sox17Q61473 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.96□□□□□ -0.49
Sox17Q61473 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.96□□□□□ -0.49
Sox17Q61473 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox17Q61473 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox17Q61473 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox17Q61473 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox17Q61473 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox17Q61473 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox17Q61473 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox17Q61473 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox17Q61473 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox17Q61473 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox17Q61473 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox17Q61473 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.96□□□□□ -0.5
Sox17Q61473 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox17Q61473 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sox17Q61473 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sox17Q61473 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.95□□□□□ -0.5
Sox17Q61473 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Sox17Q61473 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.95□□□□□ -0.5
Sox17Q61473 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 122.6 ms