Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Vsx2Q61412 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.47□□□□□ -0.41
Vsx2Q61412 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vsx2Q61412 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vsx2Q61412 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Gm14660-201ENSMUST00000119809 575 ntBASIC12.47□□□□□ -0.41
Vsx2Q61412 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.47□□□□□ -0.41
Vsx2Q61412 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.47□□□□□ -0.41
Vsx2Q61412 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.47□□□□□ -0.41
Vsx2Q61412 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.47□□□□□ -0.41
Vsx2Q61412 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.47□□□□□ -0.41
Vsx2Q61412 Gm6458-201ENSMUST00000211573 635 ntBASIC12.47□□□□□ -0.41
Vsx2Q61412 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.47□□□□□ -0.41
Vsx2Q61412 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.47□□□□□ -0.41
Vsx2Q61412 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.47□□□□□ -0.41
Vsx2Q61412 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.47□□□□□ -0.41
Vsx2Q61412 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.47□□□□□ -0.41
Vsx2Q61412 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Vsx2Q61412 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.47□□□□□ -0.41
Vsx2Q61412 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.47□□□□□ -0.41
Vsx2Q61412 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Vsx2Q61412 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vsx2Q61412 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Vsx2Q61412 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx2Q61412 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx2Q61412 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Vsx2Q61412 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx2Q61412 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Vsx2Q61412 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.46□□□□□ -0.41
Vsx2Q61412 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx2Q61412 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx2Q61412 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Vsx2Q61412 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx2Q61412 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx2Q61412 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.46□□□□□ -0.41
Vsx2Q61412 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Vsx2Q61412 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx2Q61412 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx2Q61412 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx2Q61412 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx2Q61412 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx2Q61412 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.46□□□□□ -0.41
Vsx2Q61412 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx2Q61412 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx2Q61412 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.46□□□□□ -0.41
Vsx2Q61412 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.46□□□□□ -0.41
Vsx2Q61412 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx2Q61412 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.46□□□□□ -0.41
Vsx2Q61412 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx2Q61412 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx2Q61412 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Vsx2Q61412 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx2Q61412 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Vsx2Q61412 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vsx2Q61412 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vsx2Q61412 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vsx2Q61412 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.46□□□□□ -0.42
Vsx2Q61412 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vsx2Q61412 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vsx2Q61412 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vsx2Q61412 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vsx2Q61412 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vsx2Q61412 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vsx2Q61412 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vsx2Q61412 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Vsx2Q61412 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.45□□□□□ -0.42
Vsx2Q61412 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.45□□□□□ -0.42
Vsx2Q61412 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Vsx2Q61412 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.45□□□□□ -0.42
Vsx2Q61412 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Vsx2Q61412 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms