Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col11a1Q61245 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Col11a1Q61245 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col11a1Q61245 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col11a1Q61245 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14□□□□□ -0.17
Col11a1Q61245 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col11a1Q61245 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col11a1Q61245 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Col11a1Q61245 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col11a1Q61245 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col11a1Q61245 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Col11a1Q61245 Gm12164-201ENSMUST00000121695 551 ntBASIC14□□□□□ -0.17
Col11a1Q61245 Gm25545-201ENSMUST00000122673 323 ntBASIC14□□□□□ -0.17
Col11a1Q61245 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14□□□□□ -0.17
Col11a1Q61245 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14□□□□□ -0.17
Col11a1Q61245 Gm3551-201ENSMUST00000190750 664 ntBASIC14□□□□□ -0.17
Col11a1Q61245 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC14□□□□□ -0.17
Col11a1Q61245 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC14□□□□□ -0.17
Col11a1Q61245 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col11a1Q61245 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14□□□□□ -0.17
Col11a1Q61245 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col11a1Q61245 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col11a1Q61245 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col11a1Q61245 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col11a1Q61245 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Col11a1Q61245 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Col11a1Q61245 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col11a1Q61245 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14□□□□□ -0.17
Col11a1Q61245 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col11a1Q61245 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col11a1Q61245 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col11a1Q61245 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col11a1Q61245 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col11a1Q61245 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col11a1Q61245 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col11a1Q61245 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Col11a1Q61245 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13.99□□□□□ -0.17
Col11a1Q61245 Gm12419-201ENSMUST00000116649 636 ntBASIC13.99□□□□□ -0.17
Col11a1Q61245 Gm7541-201ENSMUST00000118361 535 ntBASIC13.99□□□□□ -0.17
Col11a1Q61245 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.99□□□□□ -0.17
Col11a1Q61245 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC13.99□□□□□ -0.17
Col11a1Q61245 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.99□□□□□ -0.17
Col11a1Q61245 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col11a1Q61245 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Gm19009-201ENSMUST00000223072 823 ntBASIC13.99□□□□□ -0.17
Col11a1Q61245 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Col11a1Q61245 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Col11a1Q61245 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.99□□□□□ -0.17
Col11a1Q61245 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.99□□□□□ -0.17
Col11a1Q61245 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.99□□□□□ -0.17
Col11a1Q61245 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Gm5100-201ENSMUST00000195631 589 ntBASIC13.99□□□□□ -0.17
Col11a1Q61245 Gm8956-201ENSMUST00000203939 825 ntBASIC13.99□□□□□ -0.17
Col11a1Q61245 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Col11a1Q61245 Mir483-201ENSMUST00000093631 73 ntBASIC13.99□□□□□ -0.17
Col11a1Q61245 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.99□□□□□ -0.17
Col11a1Q61245 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col11a1Q61245 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a1Q61245 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a1Q61245 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a1Q61245 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a1Q61245 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Col11a1Q61245 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a1Q61245 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a1Q61245 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a1Q61245 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.98□□□□□ -0.17
Col11a1Q61245 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col11a1Q61245 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.98□□□□□ -0.17
Col11a1Q61245 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col11a1Q61245 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a1Q61245 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Col11a1Q61245 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a1Q61245 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col11a1Q61245 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms