Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfaip3Q60769 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfaip3Q60769 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfaip3Q60769 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfaip3Q60769 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfaip3Q60769 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfaip3Q60769 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.06□□□□□ -0.48
Tnfaip3Q60769 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfaip3Q60769 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfaip3Q60769 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tnfaip3Q60769 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Tnfaip3Q60769 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.06□□□□□ -0.48
Tnfaip3Q60769 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfaip3Q60769 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfaip3Q60769 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfaip3Q60769 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Gm23363-201ENSMUST00000175024 79 ntBASIC12.05□□□□□ -0.48
Tnfaip3Q60769 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.05□□□□□ -0.48
Tnfaip3Q60769 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Tnfaip3Q60769 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Mir1247-201ENSMUST00000116706 82 ntBASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Gm14921-201ENSMUST00000118643 908 ntBASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Gm24548-201ENSMUST00000158650 108 ntBASIC12.04□□□□□ -0.48
Tnfaip3Q60769 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfaip3Q60769 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfaip3Q60769 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Tnfaip3Q60769 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfaip3Q60769 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.03□□□□□ -0.48
Tnfaip3Q60769 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfaip3Q60769 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
Tnfaip3Q60769 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfaip3Q60769 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms