Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.6□□□□□ -0.23
Shroom1Q5SX79 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Gm16570-201ENSMUST00000161951 436 ntBASIC13.59□□□□□ -0.23
Shroom1Q5SX79 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Gm18827-201ENSMUST00000188341 790 ntBASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shroom1Q5SX79 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Shroom1Q5SX79 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.58□□□□□ -0.23
Shroom1Q5SX79 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Shroom1Q5SX79 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Mir874-201ENSMUST00000104769 76 ntBASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Gm12502-201ENSMUST00000120197 444 ntBASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shroom1Q5SX79 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms