Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Gm11949-201ENSMUST00000117640 372 ntBASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Gm9916-201ENSMUST00000192943 1228 ntBASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 AC164087.2-201ENSMUST00000216206 1072 ntBASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps13aQ5H8C4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Gm35713-201ENSMUST00000210516 199 ntBASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Gm11578-201ENSMUST00000118530 459 ntBASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps13aQ5H8C4 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Mir6973a-201ENSMUST00000183646 78 ntBASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Gm18304-201ENSMUST00000189162 546 ntBASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms