Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Gm11424-201ENSMUST00000121929 829 ntBASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf20Q5DTM8 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf20Q5DTM8 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf20Q5DTM8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf20Q5DTM8 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 AC159195.1-201ENSMUST00000225867 2086 ntBASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Gm45266-201ENSMUST00000210111 2173 ntBASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf20Q5DTM8 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms