Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Spire1Q52KF3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Spire1Q52KF3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Spire1Q52KF3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Spire1Q52KF3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Spire1Q52KF3 Gm12015-201ENSMUST00000117065 843 ntBASIC13.02□□□□□ -0.33
Spire1Q52KF3 Gm13296-201ENSMUST00000117854 997 ntBASIC13.02□□□□□ -0.33
Spire1Q52KF3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.02□□□□□ -0.33
Spire1Q52KF3 Gm14832-201ENSMUST00000121289 322 ntBASIC13.02□□□□□ -0.33
Spire1Q52KF3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.02□□□□□ -0.33
Spire1Q52KF3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.02□□□□□ -0.33
Spire1Q52KF3 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Spire1Q52KF3 Gm28882-201ENSMUST00000185504 314 ntBASIC13.02□□□□□ -0.33
Spire1Q52KF3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Spire1Q52KF3 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Spire1Q52KF3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Spire1Q52KF3 Gm44262-201ENSMUST00000204969 372 ntBASIC13.02□□□□□ -0.33
Spire1Q52KF3 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.02□□□□□ -0.33
Spire1Q52KF3 Gm10076-201ENSMUST00000073238 384 ntBASIC13.02□□□□□ -0.33
Spire1Q52KF3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Spire1Q52KF3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Spire1Q52KF3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Spire1Q52KF3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Spire1Q52KF3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Spire1Q52KF3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Spire1Q52KF3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Spire1Q52KF3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Spire1Q52KF3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Spire1Q52KF3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.01□□□□□ -0.33
Spire1Q52KF3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Spire1Q52KF3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.01□□□□□ -0.33
Spire1Q52KF3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.01□□□□□ -0.33
Spire1Q52KF3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Gm12314-201ENSMUST00000118104 538 ntBASIC13.01□□□□□ -0.33
Spire1Q52KF3 Gm13315-201ENSMUST00000120376 991 ntBASIC13.01□□□□□ -0.33
Spire1Q52KF3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Gm24845-201ENSMUST00000158034 109 ntBASIC13.01□□□□□ -0.33
Spire1Q52KF3 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.01□□□□□ -0.33
Spire1Q52KF3 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spire1Q52KF3 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.01□□□□□ -0.33
Spire1Q52KF3 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Gm8385-201ENSMUST00000058999 643 ntBASIC13.01□□□□□ -0.33
Spire1Q52KF3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.01□□□□□ -0.33
Spire1Q52KF3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Spire1Q52KF3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Spire1Q52KF3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Spire1Q52KF3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Spire1Q52KF3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Spire1Q52KF3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13□□□□□ -0.33
Spire1Q52KF3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Spire1Q52KF3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13□□□□□ -0.33
Spire1Q52KF3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13□□□□□ -0.33
Spire1Q52KF3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Spire1Q52KF3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13□□□□□ -0.33
Spire1Q52KF3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Spire1Q52KF3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Spire1Q52KF3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13□□□□□ -0.33
Spire1Q52KF3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Spire1Q52KF3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13□□□□□ -0.33
Spire1Q52KF3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Spire1Q52KF3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Spire1Q52KF3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Spire1Q52KF3 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13□□□□□ -0.33
Spire1Q52KF3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Spire1Q52KF3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Spire1Q52KF3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Spire1Q52KF3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13□□□□□ -0.33
Spire1Q52KF3 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Spire1Q52KF3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13□□□□□ -0.33
Spire1Q52KF3 Gm12217-201ENSMUST00000118858 696 ntBASIC13□□□□□ -0.33
Spire1Q52KF3 Gm15703-201ENSMUST00000120250 880 ntBASIC13□□□□□ -0.33
Spire1Q52KF3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13□□□□□ -0.33
Spire1Q52KF3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13□□□□□ -0.33
Spire1Q52KF3 Gm6963-201ENSMUST00000147879 379 ntBASIC13□□□□□ -0.33
Spire1Q52KF3 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13□□□□□ -0.33
Spire1Q52KF3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Spire1Q52KF3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms