Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Gm9755-201ENSMUST00000032981 1356 ntBASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Gm37513-201ENSMUST00000194830 2268 ntBASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Gm38378-201ENSMUST00000195153 2268 ntBASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.31■□□□□ 0.2
Ccdc27Q3V036 AC155298.2-201ENSMUST00000225485 6226 ntBASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
Ccdc27Q3V036 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc27Q3V036 Gm44292-201ENSMUST00000205194 2364 ntBASIC16.3■□□□□ 0.2
Ccdc27Q3V036 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc27Q3V036 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc27Q3V036 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc27Q3V036 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc27Q3V036 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc27Q3V036 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc27Q3V036 Gm7488-201ENSMUST00000117148 684 ntBASIC16.3■□□□□ 0.2
Ccdc27Q3V036 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.3■□□□□ 0.2
Ccdc27Q3V036 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.3■□□□□ 0.2
Ccdc27Q3V036 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc27Q3V036 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.3■□□□□ 0.2
Ccdc27Q3V036 Gm19931-201ENSMUST00000198920 368 ntBASIC16.3■□□□□ 0.2
Ccdc27Q3V036 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Ccdc27Q3V036 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc27Q3V036 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc27Q3V036 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc27Q3V036 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc27Q3V036 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc27Q3V036 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc27Q3V036 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Gm12859-201ENSMUST00000117834 427 ntBASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Gm6447-201ENSMUST00000118905 835 ntBASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Mir6392-201ENSMUST00000184924 108 ntBASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Mir7654-201ENSMUST00000185082 70 ntBASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Gm37917-201ENSMUST00000194711 392 ntBASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC16.29■□□□□ 0.2
Ccdc27Q3V036 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc27Q3V036 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC16.28■□□□□ 0.2
Ccdc27Q3V036 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc27Q3V036 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc27Q3V036 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc27Q3V036 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC16.28■□□□□ 0.2
Ccdc27Q3V036 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc27Q3V036 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc27Q3V036 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc27Q3V036 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms