Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Gm14263-201ENSMUST00000117955 746 ntBASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Gm13315-201ENSMUST00000120376 991 ntBASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Gm7003-201ENSMUST00000195089 312 ntBASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Upf3aQ3ULJ3 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Gm43378-201ENSMUST00000199336 582 ntBASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Gm43947-201ENSMUST00000203019 959 ntBASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upf3aQ3ULJ3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Upf3aQ3ULJ3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upf3aQ3ULJ3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upf3aQ3ULJ3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upf3aQ3ULJ3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.4□□□□□ -0.26
Upf3aQ3ULJ3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upf3aQ3ULJ3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upf3aQ3ULJ3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upf3aQ3ULJ3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upf3aQ3ULJ3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Upf3aQ3ULJ3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upf3aQ3ULJ3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upf3aQ3ULJ3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upf3aQ3ULJ3 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Upf3aQ3ULJ3 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Upf3aQ3ULJ3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Upf3aQ3ULJ3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Upf3aQ3ULJ3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upf3aQ3ULJ3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms