Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Gm12742-201ENSMUST00000117326 410 ntBASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Gm7809-201ENSMUST00000153199 742 ntBASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Gm3890-201ENSMUST00000182416 207 ntBASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf44Q3UHJ8 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Gm19184-201ENSMUST00000196798 928 ntBASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Gm18584-201ENSMUST00000203098 964 ntBASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
Rnf44Q3UHJ8 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf44Q3UHJ8 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Rnf44Q3UHJ8 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rnf44Q3UHJ8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rnf44Q3UHJ8 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf44Q3UHJ8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.31□□□□□ -0.44
Rnf44Q3UHJ8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf44Q3UHJ8 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf44Q3UHJ8 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf44Q3UHJ8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf44Q3UHJ8 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf44Q3UHJ8 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf44Q3UHJ8 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.31□□□□□ -0.44
Rnf44Q3UHJ8 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.31□□□□□ -0.44
Rnf44Q3UHJ8 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.31□□□□□ -0.44
Rnf44Q3UHJ8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.31□□□□□ -0.44
Rnf44Q3UHJ8 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.31□□□□□ -0.44
Rnf44Q3UHJ8 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Rnf44Q3UHJ8 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf44Q3UHJ8 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms