Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Gm14999-201ENSMUST00000121039 624 ntBASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Gm8885-201ENSMUST00000189382 598 ntBASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Gm38317-201ENSMUST00000195564 343 ntBASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Gm13097-201ENSMUST00000210722 397 ntBASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Gm39404-201ENSMUST00000216350 313 ntBASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Gm8712-201ENSMUST00000221090 701 ntBASIC13.79□□□□□ -0.2
Snx27Q3UHD6 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Gm11597-201ENSMUST00000121423 964 ntBASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Gm29199-201ENSMUST00000187766 775 ntBASIC13.78□□□□□ -0.2
Snx27Q3UHD6 AA914427-201ENSMUST00000193194 1166 ntBASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.78□□□□□ -0.2
Snx27Q3UHD6 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.78□□□□□ -0.2
Snx27Q3UHD6 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx27Q3UHD6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
Snx27Q3UHD6 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Snx27Q3UHD6 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
Snx27Q3UHD6 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.2
Snx27Q3UHD6 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.77□□□□□ -0.2
Snx27Q3UHD6 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Snx27Q3UHD6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Snx27Q3UHD6 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Snx27Q3UHD6 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms