Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Gm13263-201ENSMUST00000121271 838 ntBASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Gm43854-201ENSMUST00000200418 394 ntBASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Gm11949-201ENSMUST00000117640 372 ntBASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Gm14234-201ENSMUST00000119539 845 ntBASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.68□□□□□ -0.54
Spg11Q3UHA3 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Gm43184-201ENSMUST00000197247 542 ntBASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Gm7238-201ENSMUST00000206467 973 ntBASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.68□□□□□ -0.54
Spg11Q3UHA3 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.68□□□□□ -0.54
Spg11Q3UHA3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Gm10288-201ENSMUST00000084614 537 ntBASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Gm17796-201ENSMUST00000189015 1213 ntBASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Gm19587-201ENSMUST00000191395 545 ntBASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.67□□□□□ -0.54
Spg11Q3UHA3 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Gm13315-201ENSMUST00000120376 991 ntBASIC11.67□□□□□ -0.54
Spg11Q3UHA3 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Gm43186-201ENSMUST00000198130 824 ntBASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms