Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.11□□□□□ -0.63
Q3U1D9 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.11□□□□□ -0.63
Q3U1D9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Q3U1D9 Gm22323-201ENSMUST00000103832 109 ntBASIC11.11□□□□□ -0.63
Q3U1D9 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.11□□□□□ -0.63
Q3U1D9 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.11□□□□□ -0.63
Q3U1D9 Gm2546-201ENSMUST00000182630 991 ntBASIC11.11□□□□□ -0.63
Q3U1D9 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.11□□□□□ -0.63
Q3U1D9 Gm38092-201ENSMUST00000195600 653 ntBASIC11.11□□□□□ -0.63
Q3U1D9 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.11□□□□□ -0.63
Q3U1D9 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Q3U1D9 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Q3U1D9 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.11□□□□□ -0.63
Q3U1D9 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.11□□□□□ -0.63
Q3U1D9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Q3U1D9 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Q3U1D9 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Q3U1D9 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.1□□□□□ -0.63
Q3U1D9 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.1□□□□□ -0.63
Q3U1D9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.1□□□□□ -0.63
Q3U1D9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Q3U1D9 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.1□□□□□ -0.63
Q3U1D9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Q3U1D9 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Q3U1D9 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Q3U1D9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Q3U1D9 Daam2-202ENSMUST00000224595 1926 ntBASIC11.1□□□□□ -0.63
Q3U1D9 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.1□□□□□ -0.63
Q3U1D9 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.1□□□□□ -0.63
Q3U1D9 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.1□□□□□ -0.63
Q3U1D9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Q3U1D9 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.1□□□□□ -0.63
Q3U1D9 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.1□□□□□ -0.63
Q3U1D9 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.1□□□□□ -0.63
Q3U1D9 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.1□□□□□ -0.63
Q3U1D9 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.1□□□□□ -0.63
Q3U1D9 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Q3U1D9 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.1□□□□□ -0.63
Q3U1D9 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Q3U1D9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms