Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Gm29608-201ENSMUST00000190444 463 ntBASIC10.91□□□□□ -0.66
Fndc4Q3TR08 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.91□□□□□ -0.66
Fndc4Q3TR08 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Gm12341-201ENSMUST00000119724 503 ntBASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Gm45841-201ENSMUST00000207700 164 ntBASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Gm18624-201ENSMUST00000220966 658 ntBASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Gm15823-201ENSMUST00000064305 670 ntBASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fndc4Q3TR08 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Fndc4Q3TR08 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Fndc4Q3TR08 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Fndc4Q3TR08 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Fndc4Q3TR08 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Fndc4Q3TR08 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Fndc4Q3TR08 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Fndc4Q3TR08 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Fndc4Q3TR08 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms