Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.54□□□□□ -0.4
Q3KNL4 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Q3KNL4 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Q3KNL4 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Q3KNL4 Mir686-201ENSMUST00000102174 109 ntBASIC12.54□□□□□ -0.4
Q3KNL4 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.54□□□□□ -0.4
Q3KNL4 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Gm7488-201ENSMUST00000117148 684 ntBASIC12.54□□□□□ -0.4
Q3KNL4 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.54□□□□□ -0.4
Q3KNL4 Gm27437-201ENSMUST00000183429 107 ntBASIC12.54□□□□□ -0.4
Q3KNL4 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.54□□□□□ -0.4
Q3KNL4 Gm18473-201ENSMUST00000220543 868 ntBASIC12.54□□□□□ -0.4
Q3KNL4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Gm15823-201ENSMUST00000064305 670 ntBASIC12.54□□□□□ -0.4
Q3KNL4 Gm2423-201ENSMUST00000074863 733 ntBASIC12.54□□□□□ -0.4
Q3KNL4 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Q3KNL4 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Q3KNL4 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.54□□□□□ -0.4
Q3KNL4 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.54□□□□□ -0.4
Q3KNL4 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3KNL4 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Q3KNL4 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.53□□□□□ -0.4
Q3KNL4 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Q3KNL4 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Q3KNL4 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.53□□□□□ -0.4
Q3KNL4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Q3KNL4 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Q3KNL4 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.53□□□□□ -0.4
Q3KNL4 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.53□□□□□ -0.4
Q3KNL4 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.53□□□□□ -0.4
Q3KNL4 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.53□□□□□ -0.4
Q3KNL4 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.53□□□□□ -0.4
Q3KNL4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Q3KNL4 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.53□□□□□ -0.4
Q3KNL4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.53□□□□□ -0.4
Q3KNL4 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.53□□□□□ -0.4
Q3KNL4 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.53□□□□□ -0.4
Q3KNL4 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3KNL4 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.53□□□□□ -0.4
Q3KNL4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Q3KNL4 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.52□□□□□ -0.4
Q3KNL4 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q3KNL4 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Q3KNL4 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q3KNL4 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.52□□□□□ -0.41
Q3KNL4 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Q3KNL4 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q3KNL4 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.52□□□□□ -0.41
Q3KNL4 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q3KNL4 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Q3KNL4 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q3KNL4 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q3KNL4 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.52□□□□□ -0.41
Q3KNL4 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.52□□□□□ -0.41
Q3KNL4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.52□□□□□ -0.41
Q3KNL4 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.52□□□□□ -0.41
Q3KNL4 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.52□□□□□ -0.41
Q3KNL4 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q3KNL4 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.52□□□□□ -0.41
Q3KNL4 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms