Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx4Q07424 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx4Q07424 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC9.91□□□□□ -0.82
Cdx4Q07424 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx4Q07424 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx4Q07424 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
Cdx4Q07424 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx4Q07424 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Cdx4Q07424 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx4Q07424 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx4Q07424 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Cdx4Q07424 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx4Q07424 AC154747.3-201ENSMUST00000224471 3470 ntBASIC9.91□□□□□ -0.82
Cdx4Q07424 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx4Q07424 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx4Q07424 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC9.91□□□□□ -0.82
Cdx4Q07424 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC9.9□□□□□ -0.82
Cdx4Q07424 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx4Q07424 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Cdx4Q07424 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx4Q07424 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx4Q07424 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC9.9□□□□□ -0.82
Cdx4Q07424 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx4Q07424 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Cdx4Q07424 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx4Q07424 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Cdx4Q07424 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx4Q07424 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx4Q07424 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx4Q07424 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx4Q07424 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Cdx4Q07424 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx4Q07424 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx4Q07424 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx4Q07424 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC9.9□□□□□ -0.82
Cdx4Q07424 Gm17420-201ENSMUST00000164753 153 ntBASIC9.9□□□□□ -0.82
Cdx4Q07424 Gm24196-201ENSMUST00000179161 110 ntBASIC9.9□□□□□ -0.82
Cdx4Q07424 Mir7221-201ENSMUST00000184009 72 ntBASIC9.9□□□□□ -0.82
Cdx4Q07424 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC9.9□□□□□ -0.82
Cdx4Q07424 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx4Q07424 Gm43818-201ENSMUST00000200605 466 ntBASIC9.9□□□□□ -0.82
Cdx4Q07424 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC9.9□□□□□ -0.82
Cdx4Q07424 Gm7561-201ENSMUST00000211203 886 ntBASIC9.9□□□□□ -0.82
Cdx4Q07424 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC9.9□□□□□ -0.82
Cdx4Q07424 Gm40466-201ENSMUST00000212174 422 ntBASIC9.9□□□□□ -0.82
Cdx4Q07424 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx4Q07424 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Cdx4Q07424 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx4Q07424 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Cdx4Q07424 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx4Q07424 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx4Q07424 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Cdx4Q07424 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx4Q07424 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx4Q07424 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Cdx4Q07424 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Cdx4Q07424 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cdx4Q07424 AC096628.2-201ENSMUST00000225443 1413 ntBASIC9.9□□□□□ -0.83
Cdx4Q07424 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cdx4Q07424 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.83
Cdx4Q07424 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cdx4Q07424 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Cdx4Q07424 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Cdx4Q07424 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC9.89□□□□□ -0.83
Cdx4Q07424 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC9.89□□□□□ -0.83
Cdx4Q07424 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Cdx4Q07424 AC137842.1-201ENSMUST00000227896 2064 ntBASIC9.89□□□□□ -0.83
Cdx4Q07424 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx4Q07424 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx4Q07424 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx4Q07424 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx4Q07424 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Cdx4Q07424 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx4Q07424 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC9.89□□□□□ -0.83
Cdx4Q07424 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC9.89□□□□□ -0.83
Cdx4Q07424 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx4Q07424 Gm8213-201ENSMUST00000118191 441 ntBASIC9.89□□□□□ -0.83
Cdx4Q07424 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC9.89□□□□□ -0.83
Cdx4Q07424 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx4Q07424 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Cdx4Q07424 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx4Q07424 Gm2639-201ENSMUST00000156881 1297 ntBASIC9.89□□□□□ -0.83
Cdx4Q07424 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC9.89□□□□□ -0.83
Cdx4Q07424 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx4Q07424 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC9.89□□□□□ -0.83
Cdx4Q07424 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC9.89□□□□□ -0.83
Cdx4Q07424 Gm29608-201ENSMUST00000190444 463 ntBASIC9.89□□□□□ -0.83
Cdx4Q07424 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx4Q07424 Gm43630-201ENSMUST00000201550 776 ntBASIC9.89□□□□□ -0.83
Cdx4Q07424 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC9.89□□□□□ -0.83
Cdx4Q07424 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC9.89□□□□□ -0.83
Cdx4Q07424 AC154276.1-201ENSMUST00000228874 1299 ntBASIC9.89□□□□□ -0.83
Cdx4Q07424 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx4Q07424 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx4Q07424 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Cdx4Q07424 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Cdx4Q07424 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx4Q07424 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx4Q07424 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx4Q07424 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms