Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Col10a1Q05306 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.8□□□□□ -0.52
Col10a1Q05306 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Snord83b-201ENSMUST00000104546 94 ntBASIC11.8□□□□□ -0.52
Col10a1Q05306 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.8□□□□□ -0.52
Col10a1Q05306 Gm23363-201ENSMUST00000175024 79 ntBASIC11.8□□□□□ -0.52
Col10a1Q05306 Mir7085-201ENSMUST00000184353 66 ntBASIC11.8□□□□□ -0.52
Col10a1Q05306 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.8□□□□□ -0.52
Col10a1Q05306 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.8□□□□□ -0.52
Col10a1Q05306 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.8□□□□□ -0.52
Col10a1Q05306 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Col10a1Q05306 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Mir339-201ENSMUST00000083659 96 ntBASIC11.8□□□□□ -0.52
Col10a1Q05306 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.8□□□□□ -0.52
Col10a1Q05306 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col10a1Q05306 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.79□□□□□ -0.52
Col10a1Q05306 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.79□□□□□ -0.52
Col10a1Q05306 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Col10a1Q05306 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.79□□□□□ -0.52
Col10a1Q05306 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col10a1Q05306 Gm8099-201ENSMUST00000200510 742 ntBASIC11.79□□□□□ -0.52
Col10a1Q05306 Gm32025-201ENSMUST00000217960 307 ntBASIC11.79□□□□□ -0.52
Col10a1Q05306 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.79□□□□□ -0.52
Col10a1Q05306 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.79□□□□□ -0.52
Col10a1Q05306 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Col10a1Q05306 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Col10a1Q05306 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.79□□□□□ -0.52
Col10a1Q05306 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col10a1Q05306 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col10a1Q05306 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Col10a1Q05306 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.78□□□□□ -0.52
Col10a1Q05306 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col10a1Q05306 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col10a1Q05306 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col10a1Q05306 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Col10a1Q05306 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col10a1Q05306 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col10a1Q05306 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col10a1Q05306 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col10a1Q05306 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.78□□□□□ -0.52
Col10a1Q05306 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col10a1Q05306 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col10a1Q05306 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col10a1Q05306 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col10a1Q05306 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.78□□□□□ -0.52
Col10a1Q05306 Snora78-201ENSMUST00000158630 128 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms