Protein–RNA interactions for Protein: Q02853

Mmp11, Stromelysin-3, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp11Q02853 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp11Q02853 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp11Q02853 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Mmp11Q02853 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.44□□□□□ -0.42
Mmp11Q02853 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp11Q02853 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp11Q02853 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp11Q02853 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Mmp11Q02853 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.43□□□□□ -0.42
Mmp11Q02853 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Mmp11Q02853 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.43□□□□□ -0.42
Mmp11Q02853 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Mmp11Q02853 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.43□□□□□ -0.42
Mmp11Q02853 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.43□□□□□ -0.42
Mmp11Q02853 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.43□□□□□ -0.42
Mmp11Q02853 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.43□□□□□ -0.42
Mmp11Q02853 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.43□□□□□ -0.42
Mmp11Q02853 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Mmp11Q02853 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
Mmp11Q02853 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.43□□□□□ -0.42
Mmp11Q02853 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp11Q02853 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Mmp11Q02853 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.42□□□□□ -0.42
Mmp11Q02853 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp11Q02853 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.42□□□□□ -0.42
Mmp11Q02853 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Mmp11Q02853 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp11Q02853 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Mmp11Q02853 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp11Q02853 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp11Q02853 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp11Q02853 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.42□□□□□ -0.42
Mmp11Q02853 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp11Q02853 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp11Q02853 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp11Q02853 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp11Q02853 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.42□□□□□ -0.42
Mmp11Q02853 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.42□□□□□ -0.42
Mmp11Q02853 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp11Q02853 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp11Q02853 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp11Q02853 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp11Q02853 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp11Q02853 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Mmp11Q02853 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp11Q02853 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp11Q02853 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp11Q02853 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp11Q02853 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp11Q02853 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.42□□□□□ -0.42
Mmp11Q02853 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Mmp11Q02853 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp11Q02853 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Mmp11Q02853 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp11Q02853 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp11Q02853 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp11Q02853 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp11Q02853 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp11Q02853 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp11Q02853 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp11Q02853 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp11Q02853 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp11Q02853 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Mmp11Q02853 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Mmp11Q02853 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.41□□□□□ -0.42
Mmp11Q02853 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Mmp11Q02853 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.41□□□□□ -0.42
Mmp11Q02853 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp11Q02853 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.41□□□□□ -0.42
Mmp11Q02853 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp11Q02853 Gm16296-201ENSMUST00000159905 325 ntBASIC12.41□□□□□ -0.42
Mmp11Q02853 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms