Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.68□□□□□ -0.54
Scn1bP97952 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Scn1bP97952 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.68□□□□□ -0.54
Scn1bP97952 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.68□□□□□ -0.54
Scn1bP97952 Gm33320-201ENSMUST00000192232 530 ntBASIC11.68□□□□□ -0.54
Scn1bP97952 Gm43575-201ENSMUST00000196420 516 ntBASIC11.68□□□□□ -0.54
Scn1bP97952 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.68□□□□□ -0.54
Scn1bP97952 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.68□□□□□ -0.54
Scn1bP97952 Gm16476-201ENSMUST00000221544 139 ntBASIC11.68□□□□□ -0.54
Scn1bP97952 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.68□□□□□ -0.54
Scn1bP97952 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn1bP97952 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Scn1bP97952 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Scn1bP97952 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Scn1bP97952 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.67□□□□□ -0.54
Scn1bP97952 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.67□□□□□ -0.54
Scn1bP97952 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Gm27430-201ENSMUST00000184585 107 ntBASIC11.67□□□□□ -0.54
Scn1bP97952 Gm7063-201ENSMUST00000186840 981 ntBASIC11.67□□□□□ -0.54
Scn1bP97952 Gm44333-201ENSMUST00000197168 107 ntBASIC11.67□□□□□ -0.54
Scn1bP97952 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.67□□□□□ -0.54
Scn1bP97952 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.67□□□□□ -0.54
Scn1bP97952 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.67□□□□□ -0.54
Scn1bP97952 Shd-206ENSMUST00000225145 998 ntBASIC11.67□□□□□ -0.54
Scn1bP97952 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.67□□□□□ -0.54
Scn1bP97952 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Scn1bP97952 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Scn1bP97952 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Scn1bP97952 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Scn1bP97952 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn1bP97952 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn1bP97952 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scn1bP97952 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scn1bP97952 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.66□□□□□ -0.54
Scn1bP97952 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn1bP97952 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn1bP97952 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Scn1bP97952 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.66□□□□□ -0.54
Scn1bP97952 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn1bP97952 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Scn1bP97952 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn1bP97952 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn1bP97952 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn1bP97952 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn1bP97952 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn1bP97952 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scn1bP97952 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.66□□□□□ -0.54
Scn1bP97952 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.66□□□□□ -0.54
Scn1bP97952 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Scn1bP97952 Gm8927-201ENSMUST00000181978 981 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms