Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Smn1P97801 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smn1P97801 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.95□□□□□ -0.66
Smn1P97801 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smn1P97801 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smn1P97801 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Smn1P97801 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smn1P97801 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smn1P97801 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smn1P97801 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Smn1P97801 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Smn1P97801 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.94□□□□□ -0.66
Smn1P97801 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.94□□□□□ -0.66
Smn1P97801 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.94□□□□□ -0.66
Smn1P97801 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.94□□□□□ -0.66
Smn1P97801 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.94□□□□□ -0.66
Smn1P97801 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.94□□□□□ -0.66
Smn1P97801 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.94□□□□□ -0.66
Smn1P97801 Gm15487-201ENSMUST00000122373 465 ntBASIC10.94□□□□□ -0.66
Smn1P97801 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.94□□□□□ -0.66
Smn1P97801 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.94□□□□□ -0.66
Smn1P97801 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC10.94□□□□□ -0.66
Smn1P97801 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.94□□□□□ -0.66
Smn1P97801 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.94□□□□□ -0.66
Smn1P97801 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Gm29667-201ENSMUST00000190817 490 ntBASIC10.94□□□□□ -0.66
Smn1P97801 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.94□□□□□ -0.66
Smn1P97801 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Smn1P97801 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.94□□□□□ -0.66
Smn1P97801 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smn1P97801 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.93□□□□□ -0.66
Smn1P97801 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Smn1P97801 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Smn1P97801 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.93□□□□□ -0.66
Smn1P97801 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.93□□□□□ -0.66
Smn1P97801 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Smn1P97801 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.93□□□□□ -0.66
Smn1P97801 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.93□□□□□ -0.66
Smn1P97801 AC139382.1-201ENSMUST00000221402 498 ntBASIC10.93□□□□□ -0.66
Smn1P97801 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Smn1P97801 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.93□□□□□ -0.66
Smn1P97801 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smn1P97801 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.93□□□□□ -0.66
Smn1P97801 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Smn1P97801 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.92□□□□□ -0.66
Smn1P97801 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smn1P97801 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smn1P97801 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms