Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Lig3P97386 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.99□□□□□ -0.17
Lig3P97386 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.99□□□□□ -0.17
Lig3P97386 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Lig3P97386 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.99□□□□□ -0.17
Lig3P97386 Gm25261-201ENSMUST00000157416 134 ntBASIC13.99□□□□□ -0.17
Lig3P97386 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.99□□□□□ -0.17
Lig3P97386 Gm6621-201ENSMUST00000193251 772 ntBASIC13.99□□□□□ -0.17
Lig3P97386 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Gm24447-201ENSMUST00000083977 338 ntBASIC13.99□□□□□ -0.17
Lig3P97386 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Lig3P97386 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.99□□□□□ -0.17
Lig3P97386 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Lig3P97386 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Lig3P97386 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lig3P97386 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lig3P97386 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lig3P97386 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lig3P97386 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lig3P97386 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lig3P97386 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lig3P97386 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lig3P97386 Gm13369-201ENSMUST00000119442 987 ntBASIC13.98□□□□□ -0.17
Lig3P97386 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.98□□□□□ -0.17
Lig3P97386 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.98□□□□□ -0.17
Lig3P97386 Gm16379-201ENSMUST00000161469 348 ntBASIC13.98□□□□□ -0.17
Lig3P97386 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Lig3P97386 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.98□□□□□ -0.17
Lig3P97386 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lig3P97386 Gm8762-201ENSMUST00000193486 339 ntBASIC13.98□□□□□ -0.17
Lig3P97386 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.98□□□□□ -0.17
Lig3P97386 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lig3P97386 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.98□□□□□ -0.17
Lig3P97386 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.98□□□□□ -0.17
Lig3P97386 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lig3P97386 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Lig3P97386 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lig3P97386 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lig3P97386 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lig3P97386 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Lig3P97386 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Lig3P97386 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Lig3P97386 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Lig3P97386 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lig3P97386 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.98□□□□□ -0.17
Lig3P97386 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lig3P97386 Matn2-203ENSMUST00000226766 3252 ntBASIC13.98□□□□□ -0.17
Lig3P97386 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lig3P97386 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lig3P97386 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.98□□□□□ -0.17
Lig3P97386 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lig3P97386 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lig3P97386 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lig3P97386 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lig3P97386 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lig3P97386 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lig3P97386 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Lig3P97386 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lig3P97386 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lig3P97386 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lig3P97386 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lig3P97386 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lig3P97386 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.97□□□□□ -0.17
Lig3P97386 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lig3P97386 Gm15370-201ENSMUST00000117158 253 ntBASIC13.97□□□□□ -0.17
Lig3P97386 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.97□□□□□ -0.17
Lig3P97386 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.97□□□□□ -0.17
Lig3P97386 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.97□□□□□ -0.17
Lig3P97386 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lig3P97386 Gm16505-201ENSMUST00000179981 232 ntBASIC13.97□□□□□ -0.17
Lig3P97386 Gm37497-201ENSMUST00000195830 798 ntBASIC13.97□□□□□ -0.17
Lig3P97386 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.97□□□□□ -0.17
Lig3P97386 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.97□□□□□ -0.17
Lig3P97386 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Lig3P97386 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lig3P97386 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lig3P97386 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lig3P97386 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lig3P97386 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lig3P97386 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.97□□□□□ -0.17
Lig3P97386 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lig3P97386 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms