Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb1P70662 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb1P70662 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Ldb1P70662 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.72□□□□□ -0.37
Ldb1P70662 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb1P70662 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb1P70662 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb1P70662 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.72□□□□□ -0.37
Ldb1P70662 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Ldb1P70662 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb1P70662 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb1P70662 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ldb1P70662 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb1P70662 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb1P70662 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb1P70662 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ldb1P70662 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ldb1P70662 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Ldb1P70662 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ldb1P70662 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Ldb1P70662 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ldb1P70662 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ldb1P70662 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ldb1P70662 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ldb1P70662 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ldb1P70662 Snord83b-201ENSMUST00000104546 94 ntBASIC12.71□□□□□ -0.37
Ldb1P70662 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ldb1P70662 Gm12390-201ENSMUST00000117897 397 ntBASIC12.71□□□□□ -0.37
Ldb1P70662 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.71□□□□□ -0.37
Ldb1P70662 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.71□□□□□ -0.37
Ldb1P70662 Gm16177-201ENSMUST00000120728 718 ntBASIC12.71□□□□□ -0.37
Ldb1P70662 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ldb1P70662 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.71□□□□□ -0.37
Ldb1P70662 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.71□□□□□ -0.37
Ldb1P70662 Gm5745-201ENSMUST00000183748 313 ntBASIC12.71□□□□□ -0.37
Ldb1P70662 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.71□□□□□ -0.37
Ldb1P70662 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ldb1P70662 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ldb1P70662 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ldb1P70662 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ldb1P70662 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ldb1P70662 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Ldb1P70662 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ldb1P70662 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ldb1P70662 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ldb1P70662 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.71□□□□□ -0.38
Ldb1P70662 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ldb1P70662 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ldb1P70662 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ldb1P70662 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ldb1P70662 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ldb1P70662 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ldb1P70662 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.7□□□□□ -0.38
Ldb1P70662 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.7□□□□□ -0.38
Ldb1P70662 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.7□□□□□ -0.38
Ldb1P70662 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.7□□□□□ -0.38
Ldb1P70662 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.7□□□□□ -0.38
Ldb1P70662 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.7□□□□□ -0.38
Ldb1P70662 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ldb1P70662 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb1P70662 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.7□□□□□ -0.38
Ldb1P70662 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Ldb1P70662 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.69□□□□□ -0.38
Ldb1P70662 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ldb1P70662 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ldb1P70662 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Ldb1P70662 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ldb1P70662 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ldb1P70662 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms