Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Smad1P70340 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smad1P70340 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.19□□□□□ -0.3
Smad1P70340 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Smad1P70340 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Smad1P70340 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Mir874-201ENSMUST00000104769 76 ntBASIC13.19□□□□□ -0.3
Smad1P70340 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.19□□□□□ -0.3
Smad1P70340 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Smad1P70340 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.19□□□□□ -0.3
Smad1P70340 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.19□□□□□ -0.3
Smad1P70340 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Smad1P70340 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.19□□□□□ -0.3
Smad1P70340 Gm38144-201ENSMUST00000192790 465 ntBASIC13.19□□□□□ -0.3
Smad1P70340 Gm18054-201ENSMUST00000207539 555 ntBASIC13.19□□□□□ -0.3
Smad1P70340 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.19□□□□□ -0.3
Smad1P70340 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smad1P70340 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smad1P70340 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.19□□□□□ -0.3
Smad1P70340 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.19□□□□□ -0.3
Smad1P70340 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smad1P70340 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smad1P70340 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Smad1P70340 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Smad1P70340 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.18□□□□□ -0.3
Smad1P70340 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smad1P70340 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Smad1P70340 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.18□□□□□ -0.3
Smad1P70340 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Mir7221-201ENSMUST00000184009 72 ntBASIC13.18□□□□□ -0.3
Smad1P70340 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.18□□□□□ -0.3
Smad1P70340 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.18□□□□□ -0.3
Smad1P70340 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.18□□□□□ -0.3
Smad1P70340 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.18□□□□□ -0.3
Smad1P70340 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smad1P70340 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smad1P70340 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smad1P70340 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.18□□□□□ -0.3
Smad1P70340 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smad1P70340 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.18□□□□□ -0.3
Smad1P70340 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.17□□□□□ -0.3
Smad1P70340 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.17□□□□□ -0.3
Smad1P70340 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Smad1P70340 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Smad1P70340 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms