Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cux2P70298 Gm11422-201ENSMUST00000118925 1103 ntBASIC20.48■□□□□ 0.87
Cux2P70298 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC20.48■□□□□ 0.87
Cux2P70298 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cux2P70298 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC20.48■□□□□ 0.87
Cux2P70298 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC20.48■□□□□ 0.87
Cux2P70298 Gm9661-201ENSMUST00000221611 1122 ntBASIC20.48■□□□□ 0.87
Cux2P70298 Ap3s1-202ENSMUST00000224622 978 ntBASIC20.48■□□□□ 0.87
Cux2P70298 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cux2P70298 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cux2P70298 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cux2P70298 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cux2P70298 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cux2P70298 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cux2P70298 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
Cux2P70298 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cux2P70298 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cux2P70298 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC20.48■□□□□ 0.87
Cux2P70298 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cux2P70298 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cux2P70298 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cux2P70298 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cux2P70298 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Cux2P70298 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cux2P70298 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cux2P70298 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux2P70298 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux2P70298 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux2P70298 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Cux2P70298 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux2P70298 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cux2P70298 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC20.47■□□□□ 0.87
Cux2P70298 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux2P70298 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cux2P70298 Mir6407-201ENSMUST00000184510 101 ntBASIC20.47■□□□□ 0.87
Cux2P70298 Gm29499-201ENSMUST00000189151 486 ntBASIC20.47■□□□□ 0.87
Cux2P70298 Gm28329-201ENSMUST00000191208 689 ntBASIC20.47■□□□□ 0.87
Cux2P70298 Gm29171-201ENSMUST00000191397 486 ntBASIC20.47■□□□□ 0.87
Cux2P70298 Gm7959-201ENSMUST00000221823 1078 ntBASIC20.47■□□□□ 0.87
Cux2P70298 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC20.47■□□□□ 0.87
Cux2P70298 AC122350.1-201ENSMUST00000228135 533 ntBASIC20.47■□□□□ 0.87
Cux2P70298 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux2P70298 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux2P70298 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux2P70298 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux2P70298 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cux2P70298 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Cux2P70298 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cux2P70298 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux2P70298 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux2P70298 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC20.47■□□□□ 0.87
Cux2P70298 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux2P70298 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux2P70298 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux2P70298 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux2P70298 CT030653.1-201ENSMUST00000224382 1279 ntBASIC20.46■□□□□ 0.87
Cux2P70298 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux2P70298 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux2P70298 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Cux2P70298 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux2P70298 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux2P70298 Gm18198-201ENSMUST00000204986 1551 ntBASIC20.46■□□□□ 0.87
Cux2P70298 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cux2P70298 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux2P70298 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux2P70298 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux2P70298 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Cux2P70298 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux2P70298 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux2P70298 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Cux2P70298 Gm43267-201ENSMUST00000199664 1796 ntBASIC20.46■□□□□ 0.87
Cux2P70298 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux2P70298 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux2P70298 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux2P70298 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cux2P70298 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux2P70298 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux2P70298 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Cux2P70298 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cux2P70298 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cux2P70298 Gm12783-201ENSMUST00000121425 397 ntBASIC20.45■□□□□ 0.86
Cux2P70298 Gm5257-201ENSMUST00000121823 790 ntBASIC20.45■□□□□ 0.86
Cux2P70298 n-R5s84-201ENSMUST00000122591 109 ntBASIC20.45■□□□□ 0.86
Cux2P70298 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC20.45■□□□□ 0.86
Cux2P70298 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Cux2P70298 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cux2P70298 Gm18460-201ENSMUST00000208088 464 ntBASIC20.45■□□□□ 0.86
Cux2P70298 Gm45500-201ENSMUST00000211676 803 ntBASIC20.45■□□□□ 0.86
Cux2P70298 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cux2P70298 AC136376.2-201ENSMUST00000228819 490 ntBASIC20.45■□□□□ 0.86
Cux2P70298 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cux2P70298 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cux2P70298 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cux2P70298 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cux2P70298 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Cux2P70298 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cux2P70298 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cux2P70298 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Cux2P70298 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cux2P70298 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms