Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Six5P70178 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.98□□□□□ -0.49
Six5P70178 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Six5P70178 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Six5P70178 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.97□□□□□ -0.49
Six5P70178 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.97□□□□□ -0.49
Six5P70178 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.97□□□□□ -0.49
Six5P70178 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.97□□□□□ -0.49
Six5P70178 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.97□□□□□ -0.49
Six5P70178 Gm13829-201ENSMUST00000119600 138 ntBASIC11.97□□□□□ -0.49
Six5P70178 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.97□□□□□ -0.49
Six5P70178 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.97□□□□□ -0.49
Six5P70178 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.97□□□□□ -0.49
Six5P70178 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.97□□□□□ -0.49
Six5P70178 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Six5P70178 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.97□□□□□ -0.49
Six5P70178 Gm45784-201ENSMUST00000188360 142 ntBASIC11.97□□□□□ -0.49
Six5P70178 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.97□□□□□ -0.49
Six5P70178 Gm40466-201ENSMUST00000212174 422 ntBASIC11.97□□□□□ -0.49
Six5P70178 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Gm32025-201ENSMUST00000217960 307 ntBASIC11.97□□□□□ -0.49
Six5P70178 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.97□□□□□ -0.49
Six5P70178 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Six5P70178 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Six5P70178 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Six5P70178 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.97□□□□□ -0.49
Six5P70178 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Six5P70178 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Six5P70178 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.96□□□□□ -0.49
Six5P70178 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six5P70178 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six5P70178 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six5P70178 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Six5P70178 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six5P70178 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Six5P70178 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six5P70178 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Six5P70178 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six5P70178 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.96□□□□□ -0.49
Six5P70178 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six5P70178 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six5P70178 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six5P70178 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six5P70178 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Six5P70178 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.96□□□□□ -0.49
Six5P70178 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Six5P70178 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six5P70178 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six5P70178 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Six5P70178 Gm13226-201ENSMUST00000117838 404 ntBASIC11.96□□□□□ -0.49
Six5P70178 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Six5P70178 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Six5P70178 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.96□□□□□ -0.49
Six5P70178 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six5P70178 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Six5P70178 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Six5P70178 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six5P70178 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.96□□□□□ -0.5
Six5P70178 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Six5P70178 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Six5P70178 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Six5P70178 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Six5P70178 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Six5P70178 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Six5P70178 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Six5P70178 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.96□□□□□ -0.5
Six5P70178 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.95□□□□□ -0.5
Six5P70178 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms