Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.08□□□□□ -0.15
Hmgb1P63158 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.08□□□□□ -0.15
Hmgb1P63158 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hmgb1P63158 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgb1P63158 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgb1P63158 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgb1P63158 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgb1P63158 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgb1P63158 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgb1P63158 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.08□□□□□ -0.16
Hmgb1P63158 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgb1P63158 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Hmgb1P63158 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgb1P63158 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.08□□□□□ -0.16
Hmgb1P63158 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgb1P63158 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.08□□□□□ -0.16
Hmgb1P63158 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgb1P63158 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgb1P63158 Gm10686-201ENSMUST00000215389 3247 ntBASIC14.08□□□□□ -0.16
Hmgb1P63158 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgb1P63158 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgb1P63158 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.08□□□□□ -0.16
Hmgb1P63158 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgb1P63158 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgb1P63158 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgb1P63158 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgb1P63158 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Hmgb1P63158 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgb1P63158 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgb1P63158 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Hmgb1P63158 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Hmgb1P63158 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.07□□□□□ -0.16
Hmgb1P63158 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.07□□□□□ -0.16
Hmgb1P63158 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.07□□□□□ -0.16
Hmgb1P63158 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.07□□□□□ -0.16
Hmgb1P63158 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.07□□□□□ -0.16
Hmgb1P63158 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.07□□□□□ -0.16
Hmgb1P63158 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.07□□□□□ -0.16
Hmgb1P63158 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.07□□□□□ -0.16
Hmgb1P63158 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hmgb1P63158 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.07□□□□□ -0.16
Hmgb1P63158 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Hmgb1P63158 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hmgb1P63158 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgb1P63158 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Hmgb1P63158 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hmgb1P63158 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.06□□□□□ -0.16
Hmgb1P63158 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.06□□□□□ -0.16
Hmgb1P63158 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.06□□□□□ -0.16
Hmgb1P63158 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Gm10156-201ENSMUST00000122364 462 ntBASIC14.06□□□□□ -0.16
Hmgb1P63158 Gm12091-201ENSMUST00000146791 830 ntBASIC14.06□□□□□ -0.16
Hmgb1P63158 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.06□□□□□ -0.16
Hmgb1P63158 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.06□□□□□ -0.16
Hmgb1P63158 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.06□□□□□ -0.16
Hmgb1P63158 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.06□□□□□ -0.16
Hmgb1P63158 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.06□□□□□ -0.16
Hmgb1P63158 Gm8515-201ENSMUST00000194852 576 ntBASIC14.06□□□□□ -0.16
Hmgb1P63158 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.06□□□□□ -0.16
Hmgb1P63158 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.06□□□□□ -0.16
Hmgb1P63158 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms