Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.62□□□□□ -0.55
Lsm3P62311 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Lsm3P62311 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.62□□□□□ -0.55
Lsm3P62311 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Lsm3P62311 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm3P62311 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm3P62311 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Lsm3P62311 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm3P62311 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm3P62311 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm3P62311 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm3P62311 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm3P62311 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm3P62311 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.61□□□□□ -0.55
Lsm3P62311 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm3P62311 Gm5566-201ENSMUST00000116118 459 ntBASIC11.61□□□□□ -0.55
Lsm3P62311 Gm14140-201ENSMUST00000119999 995 ntBASIC11.61□□□□□ -0.55
Lsm3P62311 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm3P62311 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.61□□□□□ -0.55
Lsm3P62311 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.61□□□□□ -0.55
Lsm3P62311 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm3P62311 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm3P62311 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.61□□□□□ -0.55
Lsm3P62311 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.61□□□□□ -0.55
Lsm3P62311 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm3P62311 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Lsm3P62311 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.61□□□□□ -0.55
Lsm3P62311 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.61□□□□□ -0.55
Lsm3P62311 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Lsm3P62311 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm3P62311 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm3P62311 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm3P62311 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm3P62311 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.61□□□□□ -0.55
Lsm3P62311 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm3P62311 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.61□□□□□ -0.55
Lsm3P62311 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.61□□□□□ -0.55
Lsm3P62311 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm3P62311 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.61□□□□□ -0.55
Lsm3P62311 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Lsm3P62311 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Lsm3P62311 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm3P62311 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Lsm3P62311 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.6□□□□□ -0.55
Lsm3P62311 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.6□□□□□ -0.55
Lsm3P62311 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Lsm3P62311 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Lsm3P62311 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.6□□□□□ -0.55
Lsm3P62311 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Lsm3P62311 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.6□□□□□ -0.55
Lsm3P62311 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.6□□□□□ -0.55
Lsm3P62311 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.6□□□□□ -0.55
Lsm3P62311 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Lsm3P62311 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Lsm3P62311 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.6□□□□□ -0.55
Lsm3P62311 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.6□□□□□ -0.55
Lsm3P62311 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.6□□□□□ -0.55
Lsm3P62311 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.6□□□□□ -0.55
Lsm3P62311 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.6□□□□□ -0.55
Lsm3P62311 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.6□□□□□ -0.55
Lsm3P62311 Gm16476-201ENSMUST00000221544 139 ntBASIC11.6□□□□□ -0.55
Lsm3P62311 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Lsm3P62311 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms