Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nphp4P59240 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC17.13■□□□□ 0.33
Nphp4P59240 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC17.13■□□□□ 0.33
Nphp4P59240 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC17.13■□□□□ 0.33
Nphp4P59240 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nphp4P59240 Gm9333-201ENSMUST00000205452 1323 ntBASIC17.13■□□□□ 0.33
Nphp4P59240 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nphp4P59240 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nphp4P59240 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nphp4P59240 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nphp4P59240 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nphp4P59240 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC17.13■□□□□ 0.33
Nphp4P59240 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Nphp4P59240 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nphp4P59240 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nphp4P59240 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nphp4P59240 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nphp4P59240 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nphp4P59240 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nphp4P59240 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nphp4P59240 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nphp4P59240 Gm23949-201ENSMUST00000104027 127 ntBASIC17.13■□□□□ 0.33
Nphp4P59240 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nphp4P59240 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nphp4P59240 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nphp4P59240 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC17.12■□□□□ 0.33
Nphp4P59240 Gm4735-201ENSMUST00000138679 1302 ntBASIC17.12■□□□□ 0.33
Nphp4P59240 Gm5855-201ENSMUST00000200240 1305 ntBASIC17.12■□□□□ 0.33
Nphp4P59240 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nphp4P59240 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.12■□□□□ 0.33
Nphp4P59240 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nphp4P59240 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nphp4P59240 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nphp4P59240 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nphp4P59240 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nphp4P59240 AC123619.2-202ENSMUST00000225097 1568 ntBASIC17.12■□□□□ 0.33
Nphp4P59240 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nphp4P59240 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nphp4P59240 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nphp4P59240 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.12■□□□□ 0.33
Nphp4P59240 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC17.12■□□□□ 0.33
Nphp4P59240 AC241621.2-201ENSMUST00000223991 2151 ntBASIC17.12■□□□□ 0.33
Nphp4P59240 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nphp4P59240 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nphp4P59240 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nphp4P59240 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC17.12■□□□□ 0.33
Nphp4P59240 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nphp4P59240 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nphp4P59240 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nphp4P59240 Gm12266-201ENSMUST00000120311 962 ntBASIC17.12■□□□□ 0.33
Nphp4P59240 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nphp4P59240 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nphp4P59240 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
Nphp4P59240 Gm29615-201ENSMUST00000185371 697 ntBASIC17.12■□□□□ 0.33
Nphp4P59240 Gm28224-201ENSMUST00000186078 697 ntBASIC17.12■□□□□ 0.33
Nphp4P59240 Gm29001-201ENSMUST00000186177 697 ntBASIC17.12■□□□□ 0.33
Nphp4P59240 Gm28292-201ENSMUST00000186593 697 ntBASIC17.12■□□□□ 0.33
Nphp4P59240 Gm28101-201ENSMUST00000187608 697 ntBASIC17.12■□□□□ 0.33
Nphp4P59240 Gm29076-201ENSMUST00000187689 697 ntBASIC17.12■□□□□ 0.33
Nphp4P59240 Gm28302-201ENSMUST00000187931 697 ntBASIC17.12■□□□□ 0.33
Nphp4P59240 Gm28646-201ENSMUST00000188220 697 ntBASIC17.12■□□□□ 0.33
Nphp4P59240 Gm28205-201ENSMUST00000189177 697 ntBASIC17.12■□□□□ 0.33
Nphp4P59240 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC17.12■□□□□ 0.33
Nphp4P59240 Gm29032-201ENSMUST00000189797 697 ntBASIC17.12■□□□□ 0.33
Nphp4P59240 Gm28695-201ENSMUST00000190300 697 ntBASIC17.12■□□□□ 0.33
Nphp4P59240 Gm37448-201ENSMUST00000192795 697 ntBASIC17.12■□□□□ 0.33
Nphp4P59240 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nphp4P59240 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC17.12■□□□□ 0.33
Nphp4P59240 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Nphp4P59240 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nphp4P59240 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nphp4P59240 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Nphp4P59240 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nphp4P59240 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.11■□□□□ 0.33
Nphp4P59240 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Nphp4P59240 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nphp4P59240 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nphp4P59240 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nphp4P59240 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Nphp4P59240 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC17.11■□□□□ 0.33
Nphp4P59240 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nphp4P59240 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nphp4P59240 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nphp4P59240 Gm27627-201ENSMUST00000183644 150 ntBASIC17.11■□□□□ 0.33
Nphp4P59240 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nphp4P59240 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nphp4P59240 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nphp4P59240 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nphp4P59240 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 Gm37019-201ENSMUST00000192133 2134 ntBASIC17.1■□□□□ 0.33
Nphp4P59240 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms