Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.22□□□□□ -0.45
Cdkn2bP55271 Gm14760-201ENSMUST00000121831 999 ntBASIC12.22□□□□□ -0.45
Cdkn2bP55271 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Cdkn2bP55271 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdkn2bP55271 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.22□□□□□ -0.45
Cdkn2bP55271 Gm18624-201ENSMUST00000220966 658 ntBASIC12.22□□□□□ -0.45
Cdkn2bP55271 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.22□□□□□ -0.45
Cdkn2bP55271 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Cdkn2bP55271 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Cdkn2bP55271 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Gm15920-201ENSMUST00000118998 402 ntBASIC12.21□□□□□ -0.45
Cdkn2bP55271 Gm14704-201ENSMUST00000120300 874 ntBASIC12.21□□□□□ -0.45
Cdkn2bP55271 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.21□□□□□ -0.45
Cdkn2bP55271 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.21□□□□□ -0.45
Cdkn2bP55271 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Cdkn2bP55271 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.21□□□□□ -0.45
Cdkn2bP55271 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn2bP55271 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdkn2bP55271 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Cdkn2bP55271 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdkn2bP55271 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdkn2bP55271 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Cdkn2bP55271 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.21□□□□□ -0.46
Cdkn2bP55271 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Cdkn2bP55271 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdkn2bP55271 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cdkn2bP55271 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cdkn2bP55271 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn2bP55271 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdkn2bP55271 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn2bP55271 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn2bP55271 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn2bP55271 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn2bP55271 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cdkn2bP55271 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn2bP55271 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn2bP55271 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn2bP55271 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn2bP55271 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cdkn2bP55271 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms