Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.78□□□□□ -0.36
Fdft1P53798 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.78□□□□□ -0.36
Fdft1P53798 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.78□□□□□ -0.36
Fdft1P53798 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.78□□□□□ -0.36
Fdft1P53798 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.78□□□□□ -0.36
Fdft1P53798 Gm9794-201ENSMUST00000202370 423 ntBASIC12.78□□□□□ -0.36
Fdft1P53798 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.78□□□□□ -0.36
Fdft1P53798 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Fdft1P53798 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Fdft1P53798 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Fdft1P53798 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.78□□□□□ -0.36
Fdft1P53798 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Fdft1P53798 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fdft1P53798 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fdft1P53798 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.77□□□□□ -0.36
Fdft1P53798 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.77□□□□□ -0.36
Fdft1P53798 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fdft1P53798 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.77□□□□□ -0.36
Fdft1P53798 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fdft1P53798 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fdft1P53798 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Fdft1P53798 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fdft1P53798 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fdft1P53798 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.77□□□□□ -0.37
Fdft1P53798 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.77□□□□□ -0.37
Fdft1P53798 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Fdft1P53798 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Fdft1P53798 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.77□□□□□ -0.37
Fdft1P53798 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.77□□□□□ -0.37
Fdft1P53798 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.77□□□□□ -0.37
Fdft1P53798 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.77□□□□□ -0.37
Fdft1P53798 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.77□□□□□ -0.37
Fdft1P53798 Gm8598-201ENSMUST00000221184 836 ntBASIC12.77□□□□□ -0.37
Fdft1P53798 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fdft1P53798 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fdft1P53798 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fdft1P53798 Gm5356-201ENSMUST00000093326 615 ntBASIC12.77□□□□□ -0.37
Fdft1P53798 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fdft1P53798 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.77□□□□□ -0.37
Fdft1P53798 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.77□□□□□ -0.37
Fdft1P53798 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Fdft1P53798 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.77□□□□□ -0.37
Fdft1P53798 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fdft1P53798 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Fdft1P53798 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fdft1P53798 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fdft1P53798 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fdft1P53798 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.77□□□□□ -0.37
Fdft1P53798 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fdft1P53798 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fdft1P53798 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.77□□□□□ -0.37
Fdft1P53798 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Fdft1P53798 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Fdft1P53798 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Fdft1P53798 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Fdft1P53798 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Fdft1P53798 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Fdft1P53798 Gm12490-201ENSMUST00000120255 560 ntBASIC12.76□□□□□ -0.37
Fdft1P53798 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Gm6244-201ENSMUST00000178732 841 ntBASIC12.76□□□□□ -0.37
Fdft1P53798 Proscos-202ENSMUST00000178990 666 ntBASIC12.76□□□□□ -0.37
Fdft1P53798 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.76□□□□□ -0.37
Fdft1P53798 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.76□□□□□ -0.37
Fdft1P53798 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms