Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cux1P53564 Mir7677-201ENSMUST00000184226 67 ntBASIC19.31■□□□□ 0.68
Cux1P53564 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cux1P53564 AC140293.1-201ENSMUST00000225626 1247 ntBASIC19.31■□□□□ 0.68
Cux1P53564 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cux1P53564 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cux1P53564 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cux1P53564 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cux1P53564 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cux1P53564 Gm38355-201ENSMUST00000192514 1570 ntBASIC19.31■□□□□ 0.68
Cux1P53564 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cux1P53564 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cux1P53564 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Cux1P53564 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cux1P53564 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cux1P53564 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC19.31■□□□□ 0.68
Cux1P53564 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cux1P53564 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cux1P53564 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cux1P53564 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cux1P53564 Gm8343-201ENSMUST00000182705 994 ntBASIC19.3■□□□□ 0.68
Cux1P53564 Gm43184-201ENSMUST00000197247 542 ntBASIC19.3■□□□□ 0.68
Cux1P53564 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC19.3■□□□□ 0.68
Cux1P53564 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC19.3■□□□□ 0.68
Cux1P53564 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cux1P53564 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC19.3■□□□□ 0.68
Cux1P53564 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cux1P53564 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC19.3■□□□□ 0.68
Cux1P53564 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cux1P53564 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cux1P53564 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cux1P53564 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cux1P53564 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cux1P53564 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cux1P53564 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC19.3■□□□□ 0.68
Cux1P53564 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC19.3■□□□□ 0.68
Cux1P53564 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC19.3■□□□□ 0.68
Cux1P53564 Gm4607-201ENSMUST00000206649 577 ntBASIC19.3■□□□□ 0.68
Cux1P53564 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC19.3■□□□□ 0.68
Cux1P53564 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cux1P53564 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cux1P53564 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC19.3■□□□□ 0.68
Cux1P53564 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cux1P53564 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cux1P53564 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cux1P53564 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cux1P53564 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cux1P53564 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC19.29■□□□□ 0.68
Cux1P53564 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cux1P53564 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cux1P53564 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cux1P53564 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cux1P53564 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cux1P53564 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cux1P53564 Gm44291-201ENSMUST00000203102 2865 ntBASIC19.29■□□□□ 0.68
Cux1P53564 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cux1P53564 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cux1P53564 Gm26286-201ENSMUST00000104166 134 ntBASIC19.29■□□□□ 0.68
Cux1P53564 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cux1P53564 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Cux1P53564 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cux1P53564 Gm19287-201ENSMUST00000203190 358 ntBASIC19.29■□□□□ 0.68
Cux1P53564 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cux1P53564 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cux1P53564 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cux1P53564 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC19.28■□□□□ 0.68
Cux1P53564 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cux1P53564 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cux1P53564 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC19.28■□□□□ 0.68
Cux1P53564 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
Cux1P53564 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cux1P53564 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC19.28■□□□□ 0.68
Cux1P53564 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cux1P53564 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC19.28■□□□□ 0.68
Cux1P53564 Gm6397-201ENSMUST00000161973 1069 ntBASIC19.28■□□□□ 0.68
Cux1P53564 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cux1P53564 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cux1P53564 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC19.28■□□□□ 0.68
Cux1P53564 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC19.28■□□□□ 0.68
Cux1P53564 Gm10774-201ENSMUST00000188689 204 ntBASIC19.28■□□□□ 0.68
Cux1P53564 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cux1P53564 Gm26448-201ENSMUST00000082446 203 ntBASIC19.28■□□□□ 0.68
Cux1P53564 Gm7551-201ENSMUST00000089593 1074 ntBASIC19.28■□□□□ 0.68
Cux1P53564 AC130671.2-201ENSMUST00000227224 1621 ntBASIC19.28■□□□□ 0.68
Cux1P53564 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC19.28■□□□□ 0.68
Cux1P53564 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cux1P53564 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC19.28■□□□□ 0.68
Cux1P53564 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cux1P53564 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cux1P53564 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cux1P53564 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cux1P53564 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cux1P53564 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cux1P53564 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cux1P53564 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC19.28■□□□□ 0.68
Cux1P53564 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cux1P53564 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cux1P53564 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Cux1P53564 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cux1P53564 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms