Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ClgnP52194 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.07□□□□□ -0.32
ClgnP52194 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.07□□□□□ -0.32
ClgnP52194 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClgnP52194 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.07□□□□□ -0.32
ClgnP52194 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.07□□□□□ -0.32
ClgnP52194 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClgnP52194 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ClgnP52194 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClgnP52194 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClgnP52194 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
ClgnP52194 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.07□□□□□ -0.32
ClgnP52194 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClgnP52194 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClgnP52194 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.07□□□□□ -0.32
ClgnP52194 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ClgnP52194 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.07□□□□□ -0.32
ClgnP52194 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClgnP52194 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.07□□□□□ -0.32
ClgnP52194 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.07□□□□□ -0.32
ClgnP52194 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClgnP52194 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClgnP52194 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.06□□□□□ -0.32
ClgnP52194 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
ClgnP52194 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
ClgnP52194 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 Gm11814-201ENSMUST00000119515 929 ntBASIC13.06□□□□□ -0.32
ClgnP52194 Gm12490-201ENSMUST00000120255 560 ntBASIC13.06□□□□□ -0.32
ClgnP52194 Gm11978-201ENSMUST00000122315 466 ntBASIC13.06□□□□□ -0.32
ClgnP52194 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.06□□□□□ -0.32
ClgnP52194 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC13.06□□□□□ -0.32
ClgnP52194 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.06□□□□□ -0.32
ClgnP52194 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClgnP52194 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.05□□□□□ -0.32
ClgnP52194 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC13.05□□□□□ -0.32
ClgnP52194 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
ClgnP52194 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
ClgnP52194 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.05□□□□□ -0.32
ClgnP52194 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Map1b-203ENSMUST00000223725 2669 ntBASIC13.05□□□□□ -0.32
ClgnP52194 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
ClgnP52194 Gm10156-201ENSMUST00000122364 462 ntBASIC13.05□□□□□ -0.32
ClgnP52194 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.05□□□□□ -0.32
ClgnP52194 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.05□□□□□ -0.32
ClgnP52194 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.05□□□□□ -0.32
ClgnP52194 Gm27892-201ENSMUST00000185017 106 ntBASIC13.05□□□□□ -0.32
ClgnP52194 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.05□□□□□ -0.32
ClgnP52194 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
ClgnP52194 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.05□□□□□ -0.32
ClgnP52194 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
ClgnP52194 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ClgnP52194 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
ClgnP52194 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ClgnP52194 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms