Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Gm43703-201ENSMUST00000200523 763 ntBASIC10.59□□□□□ -0.71
Nkx2-1P50220 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.59□□□□□ -0.71
Nkx2-1P50220 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Nkx2-1P50220 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Gm9063-201ENSMUST00000223299 582 ntBASIC10.59□□□□□ -0.71
Nkx2-1P50220 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Gm5161-201ENSMUST00000075243 853 ntBASIC10.59□□□□□ -0.71
Nkx2-1P50220 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-1P50220 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.58□□□□□ -0.72
Nkx2-1P50220 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Gm13223-201ENSMUST00000118609 747 ntBASIC10.58□□□□□ -0.72
Nkx2-1P50220 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Cd63-ps-201ENSMUST00000145417 875 ntBASIC10.58□□□□□ -0.72
Nkx2-1P50220 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Gm27306-201ENSMUST00000183970 107 ntBASIC10.58□□□□□ -0.72
Nkx2-1P50220 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Gm7775-201ENSMUST00000218871 853 ntBASIC10.58□□□□□ -0.72
Nkx2-1P50220 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Nkx2-1P50220 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms