Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.3□□□□□ -0.44
Prox1P48437 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.3□□□□□ -0.44
Prox1P48437 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Prox1P48437 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.29□□□□□ -0.44
Prox1P48437 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Prox1P48437 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Prox1P48437 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Prox1P48437 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.29□□□□□ -0.44
Prox1P48437 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.29□□□□□ -0.44
Prox1P48437 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.29□□□□□ -0.44
Prox1P48437 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.29□□□□□ -0.44
Prox1P48437 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prox1P48437 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.28□□□□□ -0.44
Prox1P48437 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Prox1P48437 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.28□□□□□ -0.44
Prox1P48437 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.28□□□□□ -0.44
Prox1P48437 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Prox1P48437 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Prox1P48437 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.28□□□□□ -0.44
Prox1P48437 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Prox1P48437 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Prox1P48437 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 Gm9522-201ENSMUST00000182394 926 ntBASIC12.28□□□□□ -0.44
Prox1P48437 Gm27989-201ENSMUST00000184721 107 ntBASIC12.28□□□□□ -0.44
Prox1P48437 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.28□□□□□ -0.44
Prox1P48437 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Prox1P48437 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Prox1P48437 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.28□□□□□ -0.44
Prox1P48437 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Prox1P48437 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Prox1P48437 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.28□□□□□ -0.44
Prox1P48437 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Prox1P48437 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prox1P48437 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Prox1P48437 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Prox1P48437 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Prox1P48437 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Prox1P48437 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.27□□□□□ -0.44
Prox1P48437 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Prox1P48437 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms