Protein–RNA interactions for Protein: P47955

Rplp1, 60S acidic ribosomal protein P1, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rplp1P47955 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.67□□□□□ -0.7
Rplp1P47955 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.67□□□□□ -0.7
Rplp1P47955 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rplp1P47955 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.67□□□□□ -0.7
Rplp1P47955 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Rplp1P47955 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Rplp1P47955 Gm8602-201ENSMUST00000184045 607 ntBASIC10.67□□□□□ -0.7
Rplp1P47955 Gm29608-201ENSMUST00000190444 463 ntBASIC10.67□□□□□ -0.7
Rplp1P47955 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC10.67□□□□□ -0.7
Rplp1P47955 Gm18187-201ENSMUST00000196476 984 ntBASIC10.67□□□□□ -0.7
Rplp1P47955 Gm45610-201ENSMUST00000209227 784 ntBASIC10.67□□□□□ -0.7
Rplp1P47955 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.67□□□□□ -0.7
Rplp1P47955 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.67□□□□□ -0.7
Rplp1P47955 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rplp1P47955 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rplp1P47955 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.67□□□□□ -0.7
Rplp1P47955 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.67□□□□□ -0.7
Rplp1P47955 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Matn2-203ENSMUST00000226766 3252 ntBASIC10.67□□□□□ -0.7
Rplp1P47955 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.67□□□□□ -0.7
Rplp1P47955 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.67□□□□□ -0.7
Rplp1P47955 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rplp1P47955 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.67□□□□□ -0.7
Rplp1P47955 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rplp1P47955 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Rplp1P47955 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.66□□□□□ -0.7
Rplp1P47955 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.66□□□□□ -0.7
Rplp1P47955 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.66□□□□□ -0.7
Rplp1P47955 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Rplp1P47955 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.66□□□□□ -0.7
Rplp1P47955 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Rplp1P47955 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.66□□□□□ -0.7
Rplp1P47955 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.66□□□□□ -0.7
Rplp1P47955 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.66□□□□□ -0.7
Rplp1P47955 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.66□□□□□ -0.7
Rplp1P47955 Gm5035-201ENSMUST00000215581 927 ntBASIC10.66□□□□□ -0.7
Rplp1P47955 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC10.66□□□□□ -0.7
Rplp1P47955 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.66□□□□□ -0.7
Rplp1P47955 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Rplp1P47955 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rplp1P47955 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Rplp1P47955 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Rplp1P47955 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rplp1P47955 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.66□□□□□ -0.7
Rplp1P47955 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rplp1P47955 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rplp1P47955 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.65□□□□□ -0.7
Rplp1P47955 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rplp1P47955 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rplp1P47955 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rplp1P47955 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Rplp1P47955 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms