Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nedd4P46935 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nedd4P46935 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nedd4P46935 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nedd4P46935 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nedd4P46935 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nedd4P46935 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nedd4P46935 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nedd4P46935 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nedd4P46935 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nedd4P46935 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.3■□□□□ 0.04
Nedd4P46935 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nedd4P46935 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nedd4P46935 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.3■□□□□ 0.04
Nedd4P46935 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nedd4P46935 Gm11892-201ENSMUST00000117711 1202 ntBASIC15.3■□□□□ 0.04
Nedd4P46935 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.3■□□□□ 0.04
Nedd4P46935 Gm14150-201ENSMUST00000122404 1354 ntBASIC15.3■□□□□ 0.04
Nedd4P46935 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC15.3■□□□□ 0.04
Nedd4P46935 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Nedd4P46935 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nedd4P46935 Gm5733-201ENSMUST00000190232 939 ntBASIC15.3■□□□□ 0.04
Nedd4P46935 Gm37028-201ENSMUST00000194276 107 ntBASIC15.3■□□□□ 0.04
Nedd4P46935 Gm42682-201ENSMUST00000198349 1265 ntBASIC15.3■□□□□ 0.04
Nedd4P46935 Mir7686-201ENSMUST00000200604 57 ntBASIC15.3■□□□□ 0.04
Nedd4P46935 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nedd4P46935 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nedd4P46935 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.3■□□□□ 0.04
Nedd4P46935 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nedd4P46935 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nedd4P46935 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nedd4P46935 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nedd4P46935 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nedd4P46935 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nedd4P46935 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nedd4P46935 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nedd4P46935 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Nedd4P46935 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nedd4P46935 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nedd4P46935 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nedd4P46935 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Nedd4P46935 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nedd4P46935 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nedd4P46935 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nedd4P46935 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Nedd4P46935 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.29■□□□□ 0.04
Nedd4P46935 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC15.29■□□□□ 0.04
Nedd4P46935 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.29■□□□□ 0.04
Nedd4P46935 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.29■□□□□ 0.04
Nedd4P46935 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC15.29■□□□□ 0.04
Nedd4P46935 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Nedd4P46935 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC15.29■□□□□ 0.04
Nedd4P46935 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC15.29■□□□□ 0.04
Nedd4P46935 Gm270-201ENSMUST00000223010 976 ntBASIC15.29■□□□□ 0.04
Nedd4P46935 Gm6781-201ENSMUST00000038304 1242 ntBASIC15.29■□□□□ 0.04
Nedd4P46935 Mir339-201ENSMUST00000083659 96 ntBASIC15.29■□□□□ 0.04
Nedd4P46935 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.29■□□□□ 0.04
Nedd4P46935 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 AC169511.2-201ENSMUST00000226674 2063 ntBASIC15.29■□□□□ 0.04
Nedd4P46935 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nedd4P46935 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nedd4P46935 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC15.28■□□□□ 0.04
Nedd4P46935 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nedd4P46935 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.28■□□□□ 0.04
Nedd4P46935 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.28■□□□□ 0.04
Nedd4P46935 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.28■□□□□ 0.04
Nedd4P46935 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Nedd4P46935 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Nedd4P46935 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.28■□□□□ 0.04
Nedd4P46935 Gm12816-201ENSMUST00000118069 1212 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms