Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Vps4bP46467 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.99□□□□□ -0.33
Vps4bP46467 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Vps4bP46467 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.98□□□□□ -0.33
Vps4bP46467 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
Vps4bP46467 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.98□□□□□ -0.33
Vps4bP46467 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.98□□□□□ -0.33
Vps4bP46467 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Vps4bP46467 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Vps4bP46467 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vps4bP46467 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Vps4bP46467 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Vps4bP46467 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4bP46467 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.97□□□□□ -0.33
Vps4bP46467 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.97□□□□□ -0.33
Vps4bP46467 Gm11618-201ENSMUST00000117946 267 ntBASIC12.97□□□□□ -0.33
Vps4bP46467 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Vps4bP46467 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vps4bP46467 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vps4bP46467 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Vps4bP46467 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.97□□□□□ -0.33
Vps4bP46467 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4bP46467 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Vps4bP46467 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Vps4bP46467 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4bP46467 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4bP46467 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4bP46467 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4bP46467 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4bP46467 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4bP46467 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4bP46467 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4bP46467 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4bP46467 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4bP46467 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Vps4bP46467 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Vps4bP46467 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4bP46467 Gm12742-201ENSMUST00000117326 410 ntBASIC12.96□□□□□ -0.33
Vps4bP46467 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4bP46467 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4bP46467 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4bP46467 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.96□□□□□ -0.33
Vps4bP46467 Gm38671-201ENSMUST00000200573 130 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms