Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdx2P43241 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.11□□□□□ -0.47
Cdx2P43241 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdx2P43241 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cdx2P43241 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Cdx2P43241 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Cdx2P43241 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cdx2P43241 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.11□□□□□ -0.47
Cdx2P43241 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdx2P43241 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Gm9211-201ENSMUST00000182882 975 ntBASIC12.11□□□□□ -0.47
Cdx2P43241 Gm29615-201ENSMUST00000185371 697 ntBASIC12.11□□□□□ -0.47
Cdx2P43241 Gm28224-201ENSMUST00000186078 697 ntBASIC12.11□□□□□ -0.47
Cdx2P43241 Gm29001-201ENSMUST00000186177 697 ntBASIC12.11□□□□□ -0.47
Cdx2P43241 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdx2P43241 Gm28292-201ENSMUST00000186593 697 ntBASIC12.11□□□□□ -0.47
Cdx2P43241 Gm28101-201ENSMUST00000187608 697 ntBASIC12.11□□□□□ -0.47
Cdx2P43241 Gm29076-201ENSMUST00000187689 697 ntBASIC12.11□□□□□ -0.47
Cdx2P43241 Gm28302-201ENSMUST00000187931 697 ntBASIC12.11□□□□□ -0.47
Cdx2P43241 Gm28646-201ENSMUST00000188220 697 ntBASIC12.11□□□□□ -0.47
Cdx2P43241 Gm28205-201ENSMUST00000189177 697 ntBASIC12.11□□□□□ -0.47
Cdx2P43241 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdx2P43241 Gm29032-201ENSMUST00000189797 697 ntBASIC12.11□□□□□ -0.47
Cdx2P43241 Gm28695-201ENSMUST00000190300 697 ntBASIC12.11□□□□□ -0.47
Cdx2P43241 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Gm37448-201ENSMUST00000192795 697 ntBASIC12.11□□□□□ -0.47
Cdx2P43241 AU022133-201ENSMUST00000200601 873 ntBASIC12.11□□□□□ -0.47
Cdx2P43241 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdx2P43241 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Gm7848-201ENSMUST00000210739 718 ntBASIC12.11□□□□□ -0.47
Cdx2P43241 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdx2P43241 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cdx2P43241 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdx2P43241 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cdx2P43241 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdx2P43241 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdx2P43241 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Cdx2P43241 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdx2P43241 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdx2P43241 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdx2P43241 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdx2P43241 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdx2P43241 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdx2P43241 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Cdx2P43241 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdx2P43241 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdx2P43241 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.1□□□□□ -0.47
Cdx2P43241 Gm9062-201ENSMUST00000117712 727 ntBASIC12.1□□□□□ -0.47
Cdx2P43241 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.1□□□□□ -0.47
Cdx2P43241 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdx2P43241 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdx2P43241 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.1□□□□□ -0.47
Cdx2P43241 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.1□□□□□ -0.47
Cdx2P43241 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.1□□□□□ -0.47
Cdx2P43241 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdx2P43241 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdx2P43241 Gm18734-201ENSMUST00000172937 808 ntBASIC12.1□□□□□ -0.47
Cdx2P43241 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.1□□□□□ -0.47
Cdx2P43241 Gm19187-201ENSMUST00000206781 892 ntBASIC12.1□□□□□ -0.47
Cdx2P43241 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdx2P43241 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Cdx2P43241 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdx2P43241 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.1□□□□□ -0.47
Cdx2P43241 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Cdx2P43241 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdx2P43241 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdx2P43241 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdx2P43241 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdx2P43241 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.1□□□□□ -0.47
Cdx2P43241 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdx2P43241 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Cdx2P43241 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdx2P43241 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cdx2P43241 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdx2P43241 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms