Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdh4P39038 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.25□□□□□ -0.45
Cdh4P39038 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Cdh4P39038 Gm12291-201ENSMUST00000121627 311 ntBASIC12.25□□□□□ -0.45
Cdh4P39038 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdh4P39038 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cdh4P39038 Gm8062-201ENSMUST00000139696 444 ntBASIC12.25□□□□□ -0.45
Cdh4P39038 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Gm16379-201ENSMUST00000161469 348 ntBASIC12.25□□□□□ -0.45
Cdh4P39038 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Cdh4P39038 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdh4P39038 Gm8762-201ENSMUST00000193486 339 ntBASIC12.25□□□□□ -0.45
Cdh4P39038 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.25□□□□□ -0.45
Cdh4P39038 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdh4P39038 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.25□□□□□ -0.45
Cdh4P39038 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Cdh4P39038 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cdh4P39038 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdh4P39038 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.25□□□□□ -0.45
Cdh4P39038 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.25□□□□□ -0.45
Cdh4P39038 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cdh4P39038 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cdh4P39038 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cdh4P39038 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cdh4P39038 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cdh4P39038 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cdh4P39038 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.24□□□□□ -0.45
Cdh4P39038 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.24□□□□□ -0.45
Cdh4P39038 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cdh4P39038 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdh4P39038 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Cdh4P39038 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.24□□□□□ -0.45
Cdh4P39038 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdh4P39038 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdh4P39038 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdh4P39038 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cdh4P39038 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cdh4P39038 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cdh4P39038 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cdh4P39038 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Cdh4P39038 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh4P39038 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdh4P39038 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdh4P39038 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.23□□□□□ -0.45
Cdh4P39038 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Cdh4P39038 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdh4P39038 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdh4P39038 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.23□□□□□ -0.45
Cdh4P39038 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.23□□□□□ -0.45
Cdh4P39038 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdh4P39038 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdh4P39038 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdh4P39038 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms