Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Foxa1P35582 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.81□□□□□ -0.52
Foxa1P35582 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.81□□□□□ -0.52
Foxa1P35582 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Foxa1P35582 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Foxa1P35582 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.81□□□□□ -0.52
Foxa1P35582 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.81□□□□□ -0.52
Foxa1P35582 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.81□□□□□ -0.52
Foxa1P35582 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.81□□□□□ -0.52
Foxa1P35582 Gm11591-201ENSMUST00000120063 702 ntBASIC11.81□□□□□ -0.52
Foxa1P35582 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Mir7085-201ENSMUST00000184353 66 ntBASIC11.81□□□□□ -0.52
Foxa1P35582 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.81□□□□□ -0.52
Foxa1P35582 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Snora73a-201ENSMUST00000082453 205 ntBASIC11.81□□□□□ -0.52
Foxa1P35582 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Foxa1P35582 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Foxa1P35582 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.81□□□□□ -0.52
Foxa1P35582 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
Foxa1P35582 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Foxa1P35582 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Foxa1P35582 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.81□□□□□ -0.52
Foxa1P35582 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Foxa1P35582 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxa1P35582 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Foxa1P35582 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Foxa1P35582 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.8□□□□□ -0.52
Foxa1P35582 Gm25261-201ENSMUST00000157416 134 ntBASIC11.8□□□□□ -0.52
Foxa1P35582 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Foxa1P35582 Gm5370-201ENSMUST00000187187 574 ntBASIC11.8□□□□□ -0.52
Foxa1P35582 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.8□□□□□ -0.52
Foxa1P35582 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.8□□□□□ -0.52
Foxa1P35582 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.8□□□□□ -0.52
Foxa1P35582 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Foxa1P35582 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms