Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nckap1P28660 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nckap1P28660 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nckap1P28660 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.74□□□□□ -0.37
Nckap1P28660 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nckap1P28660 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nckap1P28660 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nckap1P28660 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nckap1P28660 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nckap1P28660 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nckap1P28660 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nckap1P28660 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nckap1P28660 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nckap1P28660 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nckap1P28660 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nckap1P28660 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.74□□□□□ -0.37
Nckap1P28660 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.74□□□□□ -0.37
Nckap1P28660 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nckap1P28660 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nckap1P28660 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nckap1P28660 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nckap1P28660 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nckap1P28660 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nckap1P28660 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.73□□□□□ -0.37
Nckap1P28660 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nckap1P28660 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.73□□□□□ -0.37
Nckap1P28660 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nckap1P28660 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.73□□□□□ -0.37
Nckap1P28660 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nckap1P28660 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nckap1P28660 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nckap1P28660 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nckap1P28660 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nckap1P28660 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nckap1P28660 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Nckap1P28660 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.73□□□□□ -0.37
Nckap1P28660 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nckap1P28660 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.73□□□□□ -0.37
Nckap1P28660 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.73□□□□□ -0.37
Nckap1P28660 Gm45925-201ENSMUST00000218882 744 ntBASIC12.73□□□□□ -0.37
Nckap1P28660 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Nckap1P28660 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.73□□□□□ -0.37
Nckap1P28660 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nckap1P28660 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.73□□□□□ -0.37
Nckap1P28660 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.73□□□□□ -0.37
Nckap1P28660 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nckap1P28660 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nckap1P28660 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Nckap1P28660 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nckap1P28660 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nckap1P28660 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nckap1P28660 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nckap1P28660 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nckap1P28660 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nckap1P28660 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Nckap1P28660 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.72□□□□□ -0.37
Nckap1P28660 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.72□□□□□ -0.37
Nckap1P28660 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.72□□□□□ -0.37
Nckap1P28660 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nckap1P28660 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Nckap1P28660 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.72□□□□□ -0.37
Nckap1P28660 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nckap1P28660 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Nckap1P28660 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.72□□□□□ -0.37
Nckap1P28660 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.72□□□□□ -0.37
Nckap1P28660 Gm37466-201ENSMUST00000195692 652 ntBASIC12.72□□□□□ -0.37
Nckap1P28660 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.72□□□□□ -0.37
Nckap1P28660 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.72□□□□□ -0.37
Nckap1P28660 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Nckap1P28660 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Nckap1P28660 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 345.1 ms